DRSC/TRiP Functional Genomics Resources

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Protein Alignment lbl and HB53

DIOPT Version :10

Sequence 1:NP_001262805.1 Gene:lbl / 42541 FlyBaseID:FBgn0008651 Length:410 Species:Drosophila melanogaster
Sequence 2:NP_201471.1 Gene:HB53 / 836803 AraportID:AT5G66700 Length:228 Species:Arabidopsis thaliana


Alignment Length:135 Identity:38/135 - (28%)
Similarity:55/135 - (40%) Gaps:35/135 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   201 KSPEEQPKGASKSSGDTPLDALFQLSTKNFDEEQDPATLNIFATRSNPKKKRKSRTAFTNQQIFE 265
            |..:.:.|..||.|..|              .|:|.|.:      ....:|||    .|::|:..
plant    42 KPVKRRRKRRSKGSSAT--------------NEEDVAEI------GGMLRKRK----LTDEQVNM 82

  Fly   266 LEKRFLYQKYLSPADRDEIAGGLGLSNAQVITWFQNRRAKLKRDMEELKKDVQCEKIPDQSADPN 330
            ||..|..:..|....:::|||.|||...||..|||||||:.|.           :|:.::.|...
plant    83 LEYSFGNEHKLESGRKEKIAGELGLDPRQVAVWFQNRRARWKN-----------KKLEEEYAKLK 136

  Fly   331 RSHHN 335
            ..|.|
plant   137 NHHDN 141

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lblNP_001262805.1 COG5576 206..332 CDD:227863 35/125 (28%)
Homeodomain 252..308 CDD:459649 23/55 (42%)
HB53NP_201471.1 Homeodomain 71..125 CDD:459649 24/57 (42%)

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