DRSC/TRiP Functional Genomics Resources

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Protein Alignment lbl and HB-3

DIOPT Version :10

Sequence 1:NP_001262805.1 Gene:lbl / 42541 FlyBaseID:FBgn0008651 Length:410 Species:Drosophila melanogaster
Sequence 2:NP_568309.2 Gene:HB-3 / 831367 AraportID:AT5G15150 Length:314 Species:Arabidopsis thaliana


Alignment Length:337 Identity:70/337 - (20%)
Similarity:101/337 - (29%) Gaps:146/337 - (43%)


- Green bases have known domain annotations that are detailed below.


  Fly    65 HEEDR--VEKKPERIAIPNALP---------------GVPAPLALINERLQIPLVPNCPPPAALH 112
            :||:|  :....|.:.:..|.|               .:|:|.:|          |:|||    |
plant     4 YEEERNNINNNQEGLRLEMAFPQHGFMFQQLHEDNAHHLPSPTSL----------PSCPP----H 54

  Fly   113 TFLSPALLHSYEQRLAWDYQRQLQEHFQAQAQLLRQMTLNPAIIASEDGSSERSQRSSSSNGSTE 177
            .|..                                           .|.:....||.|..|.: 
plant    55 LFYG-------------------------------------------GGGNYMMNRSMSFTGVS- 75

  Fly   178 CCSPTQAEKVEKRSQEDRMEVPKKSPEEQPKGASKSSGDTPLDALFQLSTKNF-DEEQDPATLNI 241
                            |...:.:|||                     .:|.|. |::|.....|:
plant    76 ----------------DHHHLTQKSP---------------------TTTNNMNDQDQVGEEDNL 103

  Fly   242 FATRSN----PKKKRKSRTAFTNQQIFELEKRFLYQKYLSPADRDEIAGGLGLSNAQVITWFQNR 302
            ....|:    .||||     ...:|:..|||.|.....|.|..:.::|..|||...|:..|||||
plant   104 SDDGSHMMLGEKKKR-----LNLEQVRALEKSFELGNKLEPERKMQLAKALGLQPRQIAIWFQNR 163

  Fly   303 RAK-----LKRDMEELKKDVQCEKIPDQSADPNRSHHNHPHYHQQHQHYAHMQSIGSDRDMDKDR 362
            ||:     |:||.:.|||.....|..:.|.             ..|....|.:.:...:   .||
plant   164 RARWKTKQLERDYDSLKKQFDVLKSDNDSL-------------LAHNKKLHAELVALKK---HDR 212

  Fly   363 CREKEKDKDKEE 374
               ||..|.|.|
plant   213 ---KESAKIKRE 221

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lblNP_001262805.1 COG5576 206..332 CDD:227863 37/135 (27%)
Homeodomain 252..308 CDD:459649 21/60 (35%)
HB-3NP_568309.2 Homeodomain 115..168 CDD:459649 23/57 (40%)
HALZ 170..208 CDD:460477 10/50 (20%)

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