DRSC/TRiP Functional Genomics Resources

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Protein Alignment lbl and HB16

DIOPT Version :10

Sequence 1:NP_001262805.1 Gene:lbl / 42541 FlyBaseID:FBgn0008651 Length:410 Species:Drosophila melanogaster
Sequence 2:NP_195716.1 Gene:HB16 / 830169 AraportID:AT4G40060 Length:294 Species:Arabidopsis thaliana


Alignment Length:138 Identity:41/138 - (29%)
Similarity:65/138 - (47%) Gaps:27/138 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   187 VEKRSQEDRM--EVPKKSPEEQPKGASKSSGDTPLDALFQLSTKNFDEEQDPATLNIFATRSN-- 247
            :::.|..|.|  .:...:.|:.|:|...:         :|...:.:||:   ||| |.....|  
plant     1 MKRLSSSDSMCGLISTSTDEQSPRGYGSN---------YQSMLEGYDED---ATL-IEEYSGNHH 52

  Fly   248 ----PKKKRKSRTAFTNQQIFELEKRFLYQKYLSPADRDEIAGGLGLSNAQVITWFQNRRAKLKR 308
                .:|||:.:.    .|:..|||.|..:..|.|..:.::|..|||...||..|||||||:.| 
plant    53 HMGLSEKKRRLKV----DQVKALEKNFELENKLEPERKTKLAQELGLQPRQVAVWFQNRRARWK- 112

  Fly   309 DMEELKKD 316
             .::|:||
plant   113 -TKQLEKD 119

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lblNP_001262805.1 COG5576 206..332 CDD:227863 37/117 (32%)
Homeodomain 252..308 CDD:459649 21/55 (38%)
HB16NP_195716.1 Homeodomain 59..112 CDD:459649 23/56 (41%)
HALZ 114..155 CDD:460477 3/6 (50%)

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