DRSC/TRiP Functional Genomics Resources

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Protein Alignment lbl and AT4G03250

DIOPT Version :10

Sequence 1:NP_001262805.1 Gene:lbl / 42541 FlyBaseID:FBgn0008651 Length:410 Species:Drosophila melanogaster
Sequence 2:NP_192234.2 Gene:AT4G03250 / 827999 AraportID:AT4G03250 Length:507 Species:Arabidopsis thaliana


Alignment Length:220 Identity:46/220 - (20%)
Similarity:80/220 - (36%) Gaps:57/220 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   209 GASKSSGDTPLDALFQLSTKNFDEEQDPATLNIFATRSNPKKKRKSRTAFTNQQIFELEKRFLYQ 273
            |.:.:.||       :.||:|                   .||||.:|.   .|:..||..:...
plant     6 GEATADGD-------KASTEN-------------------SKKRKLKTP---MQVMALENFYNEH 41

  Fly   274 KYLSPADRDEIAGGLGLSNAQVITWFQNRRAKLKRDMEE-------------LKKDVQCEKIPDQ 325
            ||.:...:.::|..:||:..||..||.:||.|.||.::|             :.:|.......|.
plant    42 KYPTEEMKGKLAEEVGLTEKQVSGWFCHRRLKDKRHVKEDGNAIGSQDRSSVVLQDRGSGLRQDS 106

  Fly   326 SADPNRSHHNHPHYHQQHQHYAHMQSIGSDRDMDKDRCREKEKD--KDKEELRMLKLMTLMRYSD 388
            .....::.:.:|...:......:|.:...:.....||.....|:  ..|:.:|.::   ..||..
plant   107 CGSTKQTDYWNPKPREVESQRLYMGNADGEDSTSSDRSSSLRKNLVSSKDGIRDVE---SSRYVA 168

  Fly   389 GKLLYQQP----------PASYLPI 403
            .|.:.|.|          |:.||.:
plant   169 HKDVIQHPQFMRSYGYNKPSGYLKV 193

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lblNP_001262805.1 COG5576 206..332 CDD:227863 31/135 (23%)
Homeodomain 252..308 CDD:459649 18/55 (33%)
AT4G03250NP_192234.2 homeodomain 21..77 CDD:238039 21/58 (36%)

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