DRSC/TRiP Functional Genomics Resources

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Protein Alignment lbl and HB-12

DIOPT Version :10

Sequence 1:NP_001262805.1 Gene:lbl / 42541 FlyBaseID:FBgn0008651 Length:410 Species:Drosophila melanogaster
Sequence 2:NP_191748.1 Gene:HB-12 / 825362 AraportID:AT3G61890 Length:235 Species:Arabidopsis thaliana


Alignment Length:115 Identity:32/115 - (27%)
Similarity:50/115 - (43%) Gaps:26/115 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   247 NPKKKRKS--RTAFTNQQIFELEKRFLYQKYLSPADRDEIAGGLGLSNAQVITWFQNRRAK---- 305
            |.||.:||  :..|:.:||..||..|..:..|.|..:.::|..|||...||..||||:||:    
plant    21 NKKKMKKSNNQKRFSEEQIKSLELIFESETRLEPRKKVQVARELGLQPRQVAIWFQNKRARWKTK 85

  Fly   306 ---------------LKRDMEELKKDVQ-----CEKIPDQSADPNRSHHN 335
                           |....|.:||:.|     .:::.::...|....|:
plant    86 QLEKEYNTLRANYNNLASQFEIMKKEKQSLVSELQRLNEEMQRPKEEKHH 135

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lblNP_001262805.1 COG5576 206..332 CDD:227863 31/110 (28%)
Homeodomain 252..308 CDD:459649 23/76 (30%)
HB-12NP_191748.1 Homeodomain 33..83 CDD:459649 20/49 (41%)
HALZ 85..126 CDD:460477 5/40 (13%)

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