DRSC/TRiP Functional Genomics Resources

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Protein Alignment lbl and HB20

DIOPT Version :10

Sequence 1:NP_001262805.1 Gene:lbl / 42541 FlyBaseID:FBgn0008651 Length:410 Species:Drosophila melanogaster
Sequence 2:NP_186771.1 Gene:HB20 / 821232 AraportID:AT3G01220 Length:286 Species:Arabidopsis thaliana


Alignment Length:89 Identity:32/89 - (35%)
Similarity:44/89 - (49%) Gaps:12/89 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   244 TRSNPKKKRKSRTAFTNQQIFELEKRFLYQKYLSPADRDEIAGGLGLSNAQVITWFQNRRAK--- 305
            |....||||     ...:|:..|||.|.....|.|..:.::|..||:...|:..|||||||:   
plant    82 TMLGEKKKR-----LQLEQVKALEKSFELGNKLEPERKIQLAKALGMQPRQIAIWFQNRRARWKT 141

  Fly   306 --LKRDMEELKKDVQCEKIPDQSA 327
              |:||.:.|||  |.|.:...:|
plant   142 RQLERDYDSLKK--QFESLKSDNA 163

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lblNP_001262805.1 COG5576 206..332 CDD:227863 32/89 (36%)
Homeodomain 252..308 CDD:459649 20/60 (33%)
HB20NP_186771.1 Homeodomain 87..140 CDD:459649 22/57 (39%)
HALZ 142..183 CDD:460477 9/24 (38%)

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