DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment lbl and HB6

DIOPT Version :10

Sequence 1:NP_001262805.1 Gene:lbl / 42541 FlyBaseID:FBgn0008651 Length:410 Species:Drosophila melanogaster
Sequence 2:NP_565536.1 Gene:HB6 / 816775 AraportID:AT2G22430 Length:311 Species:Arabidopsis thaliana


Alignment Length:249 Identity:57/249 - (22%)
Similarity:93/249 - (37%) Gaps:65/249 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   164 ERSQRSSSSNGSTECCSPTQAEKVEKRSQEDRMEVPKKSPEEQPK--GASKSSGDTPLDALFQLS 226
            :|...|.|..|....|..|..:                  |:.|:  |..:          ||..
plant     3 KRLSSSDSVGGLISLCPTTSTD------------------EQSPRRYGGRE----------FQSM 39

  Fly   227 TKNFDEEQDPATLNIFATRSNPKKKRKSRTAFTNQQIFELEKRFLYQKYLSPADRDEIAGGLGLS 291
            .:.::||::.    |...|.:.....|.|....| |:..|||.|..:..|.|..:.::|..|||.
plant    40 LEGYEEEEEA----IVEERGHVGLSEKKRRLSIN-QVKALEKNFELENKLEPERKVKLAQELGLQ 99

  Fly   292 NAQVITWFQNRRAKLKRDMEELKKDVQCEKIPDQSADPNRSHHNHPHYHQQHQHYAHMQSI---- 352
            ..||..|||||||:.|  .::|:||....|....|.     .||.....:.::  :.:|.|    
plant   100 PRQVAVWFQNRRARWK--TKQLEKDYGVLKTQYDSL-----RHNFDSLRRDNE--SLLQEISKLK 155

  Fly   353 -------GSDRDMDKDRCREKEKD--KDKEELRMLKLMT--------LMRYSDG 389
                   |.:.:.:.:.....|.|  ..:||:.:.:.:|        .:.:|||
plant   156 TKLNGGGGEEEEEENNAAVTTESDISVKEEEVSLPEKITEAPSSPPQFLEHSDG 209

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lblNP_001262805.1 COG5576 206..332 CDD:227863 37/127 (29%)
Homeodomain 252..308 CDD:459649 23/55 (42%)
HB6NP_565536.1 Homeodomain 62..115 CDD:459649 23/53 (43%)
HALZ 117..158 CDD:460477 9/47 (19%)

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