DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment lbl and HB17

DIOPT Version :9

Sequence 1:NP_001262805.1 Gene:lbl / 42541 FlyBaseID:FBgn0008651 Length:410 Species:Drosophila melanogaster
Sequence 2:NP_178252.2 Gene:HB17 / 814671 AraportID:AT2G01430 Length:275 Species:Arabidopsis thaliana


Alignment Length:170 Identity:36/170 - (21%)
Similarity:61/170 - (35%) Gaps:50/170 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   248 PKKKRKSRTAFTNQQIFELEKRFLYQKYLSPADRDEIAGGLGLSNAQVITWFQNRRAKLKRDMEE 312
            |:||.:    .|.:|...||..|.....|:|..::.:|..|.|...|:..|||||||:.|....|
plant   137 PRKKLR----LTREQSRLLEDSFRQNHTLNPKQKEVLAKHLMLRPRQIEVWFQNRRARSKLKQTE 197

  Fly   313 LKKDVQCEKIPDQSADPNRSHHNHPHYHQQHQHYAHMQSIGSDRDMDKDRCREKEKDKDKEELRM 377
            :    :||.:..........:|.           .|                     ::.||||.
plant   198 M----ECEYLKRWFGSLTEENHR-----------LH---------------------REVEELRA 226

  Fly   378 LKL----------MTLMRYSDGKLLYQQPPASYLPIPHRQ 407
            :|:          :|:....:.......|..:.:|:|.::
plant   227 MKVGPTTVNSASSLTMCPRCERVTPAASPSRAVVPVPAKK 266

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lblNP_001262805.1 COG5576 206..332 CDD:227863 25/83 (30%)
Homeobox 254..307 CDD:278475 18/52 (35%)
HB17NP_178252.2 HOX 136..192 CDD:197696 21/58 (36%)
HALZ 194..237 CDD:128634 10/78 (13%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 53 1.000 Domainoid score I4196
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

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