Protein Alignment lbl and cdx4

DIOPT Version :10

• Sequence 1: NP_001262805.1
• Gene: lbl / 42541
• FlyBaseID: FBgn0008651
• Length: 410
• Species: Drosophila melanogaster
• Sequence 2: NP_571184.2
• Gene: cdx4 / 798281
• ZFINID: ZDB-GENE-980526-330
• Length: 270
• Species: Danio rerio
• Alignment Length: 174
• Identity: 49/174 - (28%)
• Similarity: 72/174 - (41%)
• Gaps: 36/174 - (20%)

  Fly   169 SSSSNGSTECCSPTQAEKVEKRS-----QEDRMEVPKKSPEEQPKGASKSSGDTPLDALFQLSTK 228
            |:||.|....|||.........|     ..:.:.|.:.|||.:.:.:            :|..:|
Zfish    86 SNSSPGPVSYCSPDYNTMHGPGSAVLPPPPENIPVAQLSPERERRNS------------YQWMSK 138

  Fly   229 NFDEEQDPATLNIFATRSNPKKKRKSRTAFTNQQIFELEKRFLYQKYLSPADRDEIAGGLGLSNA 293
            .........|          :.|.|.|..:|:.|..||||.|.:.:|::...:.|:|..||||..
Zfish   139 TVQSSSTGKT----------RTKEKYRVVYTDHQRLELEKEFHFNRYITIRRKSELAVNLGLSER 193

  Fly   294 QVITWFQNRRAKLKRDMEELKKDVQCEKIPDQSADPNRSHHNHP 337
            ||..||||||||   :.:.:||.:      .||.....|.|:.|
Zfish   194 QVKIWFQNRRAK---ERKLIKKKL------GQSDGSGGSVHSDP 228

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
lbl	NP_001262805.1	COG5576	206..332	CDD:227863	34/125 (27%)
		Homeodomain	252..308	CDD:459649	26/55 (47%)
cdx4	NP_571184.2	Caudal_act	13..146	CDD:461413	14/71 (20%)
		Homeodomain	153..208	CDD:459649	26/57 (46%)