DRSC/TRiP Functional Genomics Resources

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Protein Alignment lbl and Hhex

DIOPT Version :10

Sequence 1:NP_001262805.1 Gene:lbl / 42541 FlyBaseID:FBgn0008651 Length:410 Species:Drosophila melanogaster
Sequence 2:NP_077361.1 Gene:Hhex / 79237 RGDID:619932 Length:271 Species:Rattus norvegicus


Alignment Length:397 Identity:93/397 - (23%)
Similarity:123/397 - (30%) Gaps:173/397 - (43%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 PSPANSDVSVGSP--SPPPLRSLNMKRLRLLRSPISLEHDRQKSSPVRVKSFSIADILGRGHEED 68
            |.||.:. :||.|  :|.||                       ..|.....|.|.||||||.   
  Rat     6 PGPAAAP-AVGVPLYAPTPL-----------------------LQPAHPTPFYIDDILGRGP--- 43

  Fly    69 RVEKKPERIAIPNALPGVPAPLALINERLQIPLVPNCPPPAALHTFLSPALLHSYEQRLA----- 128
                     |.|...|.:|:|.:....     ||.:...|....|.:.||..|.....||     
  Rat    44 ---------AAPTPTPTLPSPNSSFTS-----LVSSYRTPVYEPTPVHPAFSHHPAAALAAAYGP 94

  Fly   129 -------WDYQRQLQEHFQAQAQLLRQMTLNPAIIASEDGSSERSQRSSSSNGSTECCSPTQAEK 186
                   :.:.|.:.::..|   |||                                       
  Rat    95 GGFGGPLYPFPRTVNDYTHA---LLR--------------------------------------- 117

  Fly   187 VEKRSQEDRMEVPKKSPEEQPKGASKSSGDTPLDALFQLSTKNFDEEQDPATLNIFATRSNPKKK 251
                              ..|.|                         .|...|.|..|  |..|
  Rat   118 ------------------HDPLG-------------------------KPLLWNPFLQR--PLHK 137

  Fly   252 RK-SRTAFTNQQIFELEKRFLYQKYLSPADRDEIAGGLGLSNAQVITWFQNRRAK---LKRDMEE 312
            || .:..|:|.|..||||:|..||||||.:|..:|..|.||..||.|||||||||   ||::..:
  Rat   138 RKGGQVRFSNDQTIELEKKFETQKYLSPPERKRLAKMLQLSERQVKTWFQNRRAKWRRLKQENPQ 202

  Fly   313 LKKDVQCEKIPDQSADPNRSHHNHPHYHQQHQHYAHMQSIGSDRDMDKDRC-----------REK 366
            ..|..:.:.: |.|.|             |.|.....|:.|:  .:|..:|           .|.
  Rat   203 SNKKDELDSL-DTSCD-------------QGQDLPSEQNKGA--SLDSSQCSPSPASPEDPESEI 251

  Fly   367 EKDKDKE 373
            .:|.|:|
  Rat   252 SEDSDQE 258

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lblNP_001262805.1 COG5576 206..332 CDD:227863 46/129 (36%)
Homeodomain 252..308 CDD:459649 33/59 (56%)
HhexNP_077361.1 Homeodomain 137..195 CDD:459649 33/57 (58%)

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