DRSC/TRiP Functional Genomics Resources

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Protein Alignment lbl and hmx3

DIOPT Version :10

Sequence 1:NP_001262805.1 Gene:lbl / 42541 FlyBaseID:FBgn0008651 Length:410 Species:Drosophila melanogaster
Sequence 2:NP_001072829.1 Gene:hmx3 / 780290 XenbaseID:XB-GENE-483776 Length:306 Species:Xenopus tropicalis


Alignment Length:349 Identity:91/349 - (26%)
Similarity:129/349 - (36%) Gaps:105/349 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 QKSS--PVRVKSFSIADILGRGHEEDRVEKKPERIAIP--NALPGVPAPLALINE----RLQIPL 101
            |:||  |.:...|||..:|  ..|..|..:..:.:..|  .||.|....|:.:.:    ||:|| 
 Frog     6 QESSNPPAKESPFSIKSLL--TCEPSRAVRPHKALFTPIKGALDGAAFALSPLTDLTFPRLEIP- 67

  Fly   102 VPNCPPPAALHTFLSPALLHSYEQRLAWDYQRQLQE--HFQAQAQLLRQMTLNPAIIASEDGSSE 164
                     ...|..||  |..|:..||.|...|..  |........:.:.|.|.          
 Frog    68 ---------AQRFALPA--HYLERSPAWWYSYTLAHGGHTPRTEVPDKSLLLGPT---------- 111

  Fly   165 RSQRSSSSNGSTECCSPTQAEKVEKRSQEDRMEVPKKSPEE------QP-KGASKSSGDTPLDAL 222
             |..|.....|.|...|.:||...|.|:       .|||||      :| :|....||:      
 Frog   112 -SPVSGGERDSPEPIHPLKAELEAKDSE-------SKSPEEIILEESEPEEGKKDDSGE------ 162

  Fly   223 FQLSTKNFDEEQDPATLNIFATRSNPKKKRKSRTAFTNQQIFELEKRFLYQKYLSPADRDEIAGG 287
               ..|..:|..|          ..|.:|:|:||.|:..|:|:||..|..::|||.::|..:|..
 Frog   163 ---DWKKREESPD----------KKPCRKKKTRTVFSRSQVFQLESTFDMKRYLSSSERAGLAAS 214

  Fly   288 LGLSNAQVITWFQNRRAKLKRDMEELKKDVQCEKIPDQSAD-----PNRSHHN------------ 335
            |.|:..||..||||||.|.||   :|..:::...:...:|.     |...|.|            
 Frog   215 LHLTETQVKIWFQNRRNKWKR---QLAAELEAANLSHAAAQRIVRVPILYHENSSSAESASSAAN 276

  Fly   336 -----------HPHYHQQHQHYAH 348
                       ||.|      |:|
 Frog   277 VPVSQPLLTFPHPVY------YSH 294

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lblNP_001262805.1 COG5576 206..332 CDD:227863 39/131 (30%)
Homeodomain 252..308 CDD:459649 25/55 (45%)
hmx3NP_001072829.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 95..181 26/122 (21%)
Homeodomain 179..235 CDD:459649 25/55 (45%)

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