DRSC/TRiP Functional Genomics Resources

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Protein Alignment lbl and lbx1

DIOPT Version :10

Sequence 1:NP_001262805.1 Gene:lbl / 42541 FlyBaseID:FBgn0008651 Length:410 Species:Drosophila melanogaster
Sequence 2:NP_001072559.1 Gene:lbx1 / 780014 XenbaseID:XB-GENE-6455157 Length:265 Species:Xenopus tropicalis


Alignment Length:137 Identity:80/137 - (58%)
Similarity:95/137 - (69%) Gaps:19/137 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   202 SPEEQPKGA-----SKS--SGDTPLDALFQLSTKNFD----------EEQDPATLNIFATRSNPK 249
            |..|:|..|     |::  |..:||.||.:|::|.|.          |.:|..|  ||..|..||
 Frog    61 STAEKPPAAGLPLSSRALLSQTSPLCALEELASKTFKGLEVSVLQAAEGRDGMT--IFGQRQTPK 123

  Fly   250 KKRKSRTAFTNQQIFELEKRFLYQKYLSPADRDEIAGGLGLSNAQVITWFQNRRAKLKRDMEELK 314
            |:|||||||||.||:||||||||||||||||||:||..|||:||||||||||||||||||:||:|
 Frog   124 KRRKSRTAFTNHQIYELEKRFLYQKYLSPADRDQIAQQLGLTNAQVITWFQNRRAKLKRDLEEMK 188

  Fly   315 KDVQCEK 321
            .||:..|
 Frog   189 ADVESVK 195

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lblNP_001262805.1 COG5576 206..332 CDD:227863 78/133 (59%)
Homeodomain 252..308 CDD:459649 49/55 (89%)
lbx1NP_001072559.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..33
Homeodomain 126..182 CDD:459649 49/55 (89%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 212..265
Blue background indicates that the domain is not in the aligned region.

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