DRSC/TRiP Functional Genomics Resources

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Protein Alignment lbl and Barhl2

DIOPT Version :10

Sequence 1:NP_001262805.1 Gene:lbl / 42541 FlyBaseID:FBgn0008651 Length:410 Species:Drosophila melanogaster
Sequence 2:NP_075245.1 Gene:Barhl2 / 65050 RGDID:620726 Length:384 Species:Rattus norvegicus


Alignment Length:432 Identity:105/432 - (24%)
Similarity:151/432 - (34%) Gaps:157/432 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 QRTPSPANSDVSVG-SPSPPPLRSLNMKRLRLLRSPISLEHDRQKSSPVRVKSFSIADILGRGHE 66
            |.||||.:...:|| :||                ||||:                          
  Rat    47 QATPSPCSEIDTVGTAPS----------------SPISV-------------------------- 69

  Fly    67 EDRVEKKPERIAIPNALPGVPAPLALINERLQIPLVPNCPPPAALHTFLSPALLHSYEQRLAWDY 131
               ..:.||    |:.:...|.....::...| |..|:.||..:|..  ||              
  Rat    70 ---TLEPPE----PHLVTDGPQHHHHLHHGQQ-PPPPSAPPAQSLQP--SP-------------- 110

  Fly   132 QRQLQEHFQAQAQLLRQMTLNPAIIASEDGSSERSQRSSSSN------------------GSTEC 178
            |:|.....|:.||.|              ||:..:.|:|:|:                  .||..
  Rat   111 QQQPPPQPQSAAQQL--------------GSAAAAPRTSTSSFLIKDILGDSKPLAACAPYSTSV 161

  Fly   179 CSPTQAEKVEKRSQEDRMEVPKKSPEEQPKGASKSSGDTPLDALFQLSTKNFDEEQDPATLNIFA 243
            .||....|.|..:..:... ||...|:     ||:..|...|:...:......||.|   ..|.:
  Rat   162 SSPHHTPKQECNAAHESFR-PKLEQED-----SKTKLDKREDSQSDIKCHGTKEEGD---REITS 217

  Fly   244 TRSNP----KKKRKSRTAFTNQQIFELEKRFLYQKYLSPADRDEIAGGLGLSNAQVITWFQNRRA 304
            :|.:|    ||.||:||||::.|:.:||:.|..|||||..||.::|..|.|::.||.||:||||.
  Rat   218 SRESPPVRAKKPRKARTAFSDHQLNQLERSFERQKYLSVQDRMDLAAALNLTDTQVKTWYQNRRT 282

  Fly   305 KLKRD----MEELKKDVQCEKIPDQSADPNRSHHNHPHYHQQHQHYAHMQSIGSDRDMDKDRCRE 365
            |.||.    :|.|.:......:......|               ::.|...:||   ||....  
  Rat   283 KWKRQTAVGLELLAEAGNYSALQRMFPSP---------------YFYHPSLLGS---MDSTTA-- 327

  Fly   366 KEKDKDKEELRMLKLMTLMRYSDGKLLYQQPPASYLPIPHRQ 407
                         .......||.   :|:.|||     ||.|
  Rat   328 -------------AAAAAAMYSS---MYRTPPA-----PHPQ 348

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lblNP_001262805.1 COG5576 206..332 CDD:227863 46/133 (35%)
Homeodomain 252..308 CDD:459649 29/55 (53%)
Barhl2NP_075245.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..134 33/166 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 154..237 26/91 (29%)
Homeodomain 230..286 CDD:459649 29/55 (53%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 364..384
Blue background indicates that the domain is not in the aligned region.

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