DRSC/TRiP Functional Genomics Resources

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Protein Alignment lbl and lbx2

DIOPT Version :10

Sequence 1:NP_001262805.1 Gene:lbl / 42541 FlyBaseID:FBgn0008651 Length:410 Species:Drosophila melanogaster
Sequence 2:NP_001007135.1 Gene:lbx2 / 64276 ZFINID:ZDB-GENE-001206-2 Length:257 Species:Danio rerio


Alignment Length:299 Identity:105/299 - (35%)
Similarity:135/299 - (45%) Gaps:80/299 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    95 ERLQIPLVPNCPPPAALHTFLSPALLHSYEQRLAWDYQRQLQEHFQAQAQLLRQMTLNPAIIASE 159
            ||.:.|| ...||||..:..|:|..:..                           .||...:...
Zfish    20 ERRRGPL-DQLPPPANSNKPLTPFSIED---------------------------ILNKPSVKKS 56

  Fly   160 DGSSERSQRSSSSNGSTECCSPTQAEKVEKRSQEDRMEVPKKSPEEQPKGASK---SSGDTPLDA 221
            .||               .|.|...|||...|                  ||:   |:..:||.|
Zfish    57 VGS---------------LCPPRVLEKVTGSS------------------ASRNGISAPSSPLCA 88

  Fly   222 LFQLSTKNF--------DEEQDPATLNIFATRSNPKKKRKSRTAFTNQQIFELEKRFLYQKYLSP 278
            |.:|::|.|        ...:....:|.|..|...||:|||||||||.||:||||||||||||||
Zfish    89 LEELASKTFKGLEVSVIQAAEGREHINAFGQRQASKKRRKSRTAFTNHQIYELEKRFLYQKYLSP 153

  Fly   279 ADRDEIAGGLGLSNAQVITWFQNRRAKLKRDMEELKKDVQ-CEKIPDQS-------ADPNRSHHN 335
            ||||:||..|||:||||||||||||||||||:||:|.||: .:|||.|:       .|...:|..
Zfish   154 ADRDQIAQQLGLTNAQVITWFQNRRAKLKRDLEEMKADVESLKKIPPQALQKLVSMEDMEDAHGG 218

  Fly   336 HPHYHQQHQHYAHMQSIGSDRDMDKDRCREKEKDKDKEE 374
            ...........|..||..|.|....|...|::::.:.::
Zfish   219 SGPISPSLSPRAFPQSPSSSRGQTTDEFSEEDEEIEVDD 257

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lblNP_001262805.1 COG5576 206..332 CDD:227863 77/144 (53%)
Homeodomain 252..308 CDD:459649 49/55 (89%)
lbx2NP_001007135.1 Required for convergent extension movement and hypaxial myogenesis during gastrulation. Required for the formation of thick and thin myofilaments. Required for myod1 expression in the pectoral fin bud. Required for continuous expression of cxcl12a in the posterior lateral mesoderm at the tail bud stage and in adaxial cells at the 10-somite stage. /evidence=ECO:0000269|PubMed:19216761, ECO:0000269|PubMed:22216300, ECO:0000269|PubMed:22406073 1..46 10/26 (38%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..43 10/23 (43%)
Homeodomain 127..183 CDD:459649 49/55 (89%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 206..257 9/50 (18%)

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