DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment lbl and Dfd

DIOPT Version :10

Sequence 1:NP_001262805.1 Gene:lbl / 42541 FlyBaseID:FBgn0008651 Length:410 Species:Drosophila melanogaster
Sequence 2:XP_001688962.1 Gene:Dfd / 5667644 VectorBaseID:AGAMI1_000814 Length:577 Species:Anopheles gambiae


Alignment Length:265 Identity:67/265 - (25%)
Similarity:95/265 - (35%) Gaps:96/265 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   150 TLNPAIIASEDGSSERSQRSSSSN-----------GSTE----------CCSPTQAEKVEKRSQE 193
            ||.|::..:...||..:|.|..:|           .|||          .|..|:........||
Mosquito   177 TLPPSVSTAASNSSVSNQNSFPTNITSGYYNGYYSASTEGHTSIMDTPLQCVGTEVTNTALGLQE 241

  Fly   194 DRMEVPKKSPEEQPKG--------------ASK--------------------SSGDTPLDALFQ 224
            ..|::.::..|..|.|              ||.                    .|.|..:|.|  
Mosquito   242 LGMKLDRRIEEAAPTGQQLQELGMRLRCDDASSDQDEFLDEERLMLDQSPDELDSNDGDIDDL-- 304

  Fly   225 LSTKNFDEEQDPATLN--------------------IFATRSNPKKKRKSRTAFTNQQIFELEKR 269
            .|..:..|:...||.:                    .|.....||::   |||:|..||.||||.
Mosquito   305 ESDNDLGEDVMHATSDGERIIYPWMKKIHVAGVANGSFQPGMEPKRQ---RTAYTRHQILELEKE 366

  Fly   270 FLYQKYLSPADRDEIAGGLGLSNAQVITWFQNRRAKLKRDMEELKKDVQCEKIPD------QSAD 328
            |.|.:||:...|.|||..|.||..|:..||||||.|.|:|          .|:|:      ::.|
Mosquito   367 FHYNRYLTRRRRIEIAHTLVLSERQIKIWFQNRRMKWKKD----------NKLPNTKNVRKKNGD 421

  Fly   329 PNRSH 333
            .::|:
Mosquito   422 QSKSN 426

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lblNP_001262805.1 COG5576 206..332 CDD:227863 49/185 (26%)
Homeodomain 252..308 CDD:459649 29/55 (53%)
DfdXP_001688962.1 Homeodomain 349..405 CDD:459649 30/58 (52%)

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