DRSC/TRiP Functional Genomics Resources

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Protein Alignment lbl and barhl1b

DIOPT Version :10

Sequence 1:NP_001262805.1 Gene:lbl / 42541 FlyBaseID:FBgn0008651 Length:410 Species:Drosophila melanogaster
Sequence 2:NP_001018142.1 Gene:barhl1b / 553186 ZFINID:ZDB-GENE-060118-2 Length:323 Species:Danio rerio


Alignment Length:199 Identity:68/199 - (34%)
Similarity:89/199 - (44%) Gaps:58/199 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   134 QLQEHFQAQAQLLRQMTLNPAIIASEDGSSERSQRSS-------------------SSNGSTECC 179
            |.|.|..|.|..|:...::.       ||..|:..||                   ||||     
Zfish    67 QRQGHPLAYASHLQHGPISA-------GSQPRTVASSFLIRDILADCKPLAACAPYSSNG----- 119

  Fly   180 SPTQ-AEKVEKRSQEDRMEVPKKSPEEQPKGASKSSGDTPLDALFQLSTKNFDEEQDPATLNIFA 243
            .||| |.::..:..:|.:|          |..|.||.|         |.....||.|   ..|.:
Zfish   120 QPTQEAGRLASKIADDLIE----------KIHSNSSSD---------SEYKVKEEGD---REISS 162

  Fly   244 TRSNP----KKKRKSRTAFTNQQIFELEKRFLYQKYLSPADRDEIAGGLGLSNAQVITWFQNRRA 304
            :|.:|    ||.||:|||||:.|:.:||:.|..|||||..||.|:|..|.|::.||.||:||||.
Zfish   163 SRDSPQVRLKKPRKARTAFTDHQLAQLERSFERQKYLSVQDRMELAASLNLTDTQVKTWYQNRRT 227

  Fly   305 KLKR 308
            |.||
Zfish   228 KWKR 231

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lblNP_001262805.1 COG5576 206..332 CDD:227863 47/107 (44%)
Homeodomain 252..308 CDD:459649 31/55 (56%)
barhl1bNP_001018142.1 Homeodomain 175..231 CDD:459649 31/55 (56%)

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