DRSC/TRiP Functional Genomics Resources

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Protein Alignment lbl and barhl1a

DIOPT Version :10

Sequence 1:NP_001262805.1 Gene:lbl / 42541 FlyBaseID:FBgn0008651 Length:410 Species:Drosophila melanogaster
Sequence 2:NP_001017712.3 Gene:barhl1a / 550407 ZFINID:ZDB-GENE-050417-212 Length:299 Species:Danio rerio


Alignment Length:202 Identity:63/202 - (31%)
Similarity:96/202 - (47%) Gaps:41/202 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   145 LLRQMTLNPAIIASEDGS-SERSQRSSSSNGSTECCSPTQA---EKVEKRSQEDRMEVPKKSPEE 205
            :|.....:|.:...|..| :|.|.||...:|.:...||.::   :.|.:|::...::.|.:. .:
Zfish    14 ILSHRASSPCMSKGECRSPAELSPRSDLDSGCSSPPSPRRSSVEDAVHRRARALGLDSPLQI-SQ 77

  Fly   206 QPK---------------------------GASKSSGDTPLDALFQLSTKNFDEE---QDPATLN 240
            ||:                           |.|....:..:|.|.  |..:.|.|   :|.|...
Zfish    78 QPRTVTSSFLIRDILADCKPLAACAPYSSTGQSAQDAEDCMDKLH--SNSSSDSEYRVKDEADRE 140

  Fly   241 IFATRSNP----KKKRKSRTAFTNQQIFELEKRFLYQKYLSPADRDEIAGGLGLSNAQVITWFQN 301
            |.::|.:|    ||.||:|||||:.|:.:||:.|..|||||..||.|:|..|.|::.||.||:||
Zfish   141 ISSSRDSPNSRLKKPRKARTAFTDHQLAQLERSFERQKYLSVQDRMELAASLNLTDTQVKTWYQN 205

  Fly   302 RRAKLKR 308
            ||.|.||
Zfish   206 RRTKWKR 212

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lblNP_001262805.1 COG5576 206..332 CDD:227863 49/137 (36%)
Homeodomain 252..308 CDD:459649 31/55 (56%)
barhl1aNP_001017712.3 None

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