DRSC/TRiP Functional Genomics Resources

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Protein Alignment lbl and Barhl1

DIOPT Version :10

Sequence 1:NP_001262805.1 Gene:lbl / 42541 FlyBaseID:FBgn0008651 Length:410 Species:Drosophila melanogaster
Sequence 2:NP_062319.1 Gene:Barhl1 / 54422 MGIID:1859288 Length:327 Species:Mus musculus


Alignment Length:202 Identity:60/202 - (29%)
Similarity:88/202 - (43%) Gaps:44/202 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   149 MTLNPAIIASEDGSSERSQRSSSSNGSTECCSPTQAEKVEKRSQEDRMEVPKKS----------- 202
            :.|:|...:|.|.||..|........||..........::...|..::..|.:|           
Mouse    36 LELSPRSESSSDCSSPASPGRDCLETSTSRPGAASGPGLDSHLQPGQLSAPAQSRTVTSSFLIRD 100

  Fly   203 ----------------------PEEQPKGASKSSGD--TPLDALFQLSTKNFDEE---QDPATLN 240
                                  ||...:.|:|:..|  ..||.  .:|:.:.|.|   ::.....
Mouse   101 ILADCKPLAACAPYSSSGQPAAPEPGGRLAAKAGEDFRDKLDK--SVSSASSDSEYKVKEEGDRE 163

  Fly   241 IFATRSNP----KKKRKSRTAFTNQQIFELEKRFLYQKYLSPADRDEIAGGLGLSNAQVITWFQN 301
            |.::|.:|    ||.||:|||||:.|:.:||:.|..|||||..||.|:|..|.|::.||.||:||
Mouse   164 ISSSRDSPPVRLKKPRKARTAFTDHQLAQLERSFERQKYLSVQDRMELAASLNLTDTQVKTWYQN 228

  Fly   302 RRAKLKR 308
            ||.|.||
Mouse   229 RRTKWKR 235

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lblNP_001262805.1 COG5576 206..332 CDD:227863 46/112 (41%)
Homeodomain 252..308 CDD:459649 31/55 (56%)
Barhl1NP_062319.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..90 11/53 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 113..181 16/69 (23%)
Homeodomain 179..235 CDD:459649 31/55 (56%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 303..327
Blue background indicates that the domain is not in the aligned region.

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