DRSC/TRiP Functional Genomics Resources

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Protein Alignment lbl and HGTX

DIOPT Version :10

Sequence 1:NP_001262805.1 Gene:lbl / 42541 FlyBaseID:FBgn0008651 Length:410 Species:Drosophila melanogaster
Sequence 2:NP_001368954.1 Gene:HGTX / 53446 FlyBaseID:FBgn0040318 Length:587 Species:Drosophila melanogaster


Alignment Length:474 Identity:105/474 - (22%)
Similarity:150/474 - (31%) Gaps:190/474 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 PQRTPSPANSDV-SVGSPSPPPLRSLNMKRLRLLRSPISLEHDRQKSSP--VRVKSFSIADILGR 63
            |..||.||:|.: |..||||                  ..||:   |||  ...||::::. ...
  Fly   179 PSTTPPPASSRLHSDSSPSP------------------RYEHN---SSPGVDSAKSYALSQ-RSS 221

  Fly    64 GHE-------------EDRVEKKPERIAIPNAL----PGVPAPLALINER--------------- 96
            |.|             :.:.:..||.::...|.    .|| .||||.|..               
  Fly   222 GAEDPCQTSESASPPPQGQNDYSPENLSSQRAKFQHHHGV-NPLALHNANHAGNPGCHNNNNHMD 285

  Fly    97 LQIPLVPNCPPPAALHTFLSPALLHSYEQRLAWDYQRQLQEHFQAQAQLLRQMTLNPAIIASEDG 161
            .::||....||.||||:             :..:.:.|......|.|..|.......:.:.|:.|
  Fly   286 HKLPLSFLGPPLAALHS-------------MTTEMKGQGVGGSSASANGLSYSHSPNSHLISDRG 337

  Fly   162 SSERSQRSSSSNGSTECCSPTQAEKVEKRSQEDRMEVPKKSPEEQPKGASKSSG----------- 215
            |...|..||::..:|..........::        .:..|.|.....|.|..:|           
  Fly   338 SGGSSSSSSTTTTNTNSQGAPNPHGID--------TILSKPPPVTSAGLSALTGAGIPRFSIAAA 394

  Fly   216 ------------DTPL-----------------------------DALFQLSTKNFDE--EQDPA 237
                        ..||                             :.|....:.|..:  :..| 
  Fly   395 AAGMAQYLSQSQGAPLKTHAGHIVDRTHLYWPGLQGLVANPIAWRERLSNTMSANLSQSHQHHP- 458

  Fly   238 TLNIFATRSNPK--KKRKSRTAFTNQQIFELEKRFLYQKYLSPADRDEIAGGLGLSNAQVITWFQ 300
                    ||.|  ||:.:|..|:.||||.|||.|...|||:..:|.::|..||:|.:||..|||
  Fly   459 --------SNDKDGKKKHTRPTFSGQQIFALEKTFEQTKYLAGPERAKLAYALGMSESQVKVWFQ 515

  Fly   301 NRRAKLKRDMEELKKDVQCEKIPDQSADPNRSHHNHPHYHQQHQHYAHM-------QSIGSDRDM 358
            |||.|.::                                   :|.|.|       ..:|.|.|.
  Fly   516 NRRTKWRK-----------------------------------RHAAEMATAKRKQDDMGGDNDG 545

  Fly   359 DKDRCREKEKDKDKEELRM 377
            |   |.| ..|.|.|.|.|
  Fly   546 D---CSE-TMDSDNESLDM 560

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lblNP_001262805.1 COG5576 206..332 CDD:227863 40/181 (22%)
Homeodomain 252..308 CDD:459649 27/55 (49%)
HGTXNP_001368954.1 ROM1 179..>388 CDD:227709 54/252 (21%)
Homeodomain 465..523 CDD:459649 29/57 (51%)

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