DRSC/TRiP Functional Genomics Resources

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Protein Alignment lbl and hoxa5

DIOPT Version :10

Sequence 1:NP_001262805.1 Gene:lbl / 42541 FlyBaseID:FBgn0008651 Length:410 Species:Drosophila melanogaster
Sequence 2:NP_001011405.1 Gene:hoxa5 / 496880 XenbaseID:XB-GENE-486061 Length:274 Species:Xenopus tropicalis


Alignment Length:236 Identity:60/236 - (25%)
Similarity:86/236 - (36%) Gaps:64/236 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   120 LHSYEQRLAWDYQ-------RQLQEHFQAQAQLLRQMTLNP------------------------ 153
            :||  .|..:.|.       |....||.|..: .|....||                        
 Frog    40 MHS--SRYGYGYNGMDLSVGRSASNHFSANDR-ARNYPSNPSSSTEPRYNQPAASAHSPPPDPLP 101

  Fly   154 --AIIASEDGSSERSQRSSSSN-GSTECCSPTQAEKVEKRSQEDRMEVPKKSPEEQPKGASKSSG 215
              |:..|....|.:..::|.:| .:|...|...:.........|.:            |||..:.
 Frog   102 CTAVATSPVSDSHQGGKNSITNSNNTTSNSSNSSTGTSTHINRDGL------------GASSGAE 154

  Fly   216 DTPLDALFQLSTKNFDEEQDPA------------TLNIFATRSNPKKKRKSRTAFTNQQIFELEK 268
            |....:..|.|::|   .|.||            .|:|........:.:::|||:|..|..||||
 Frog   155 DDAPASSDQASSQN---SQSPAPSVQPQIYPWMRKLHISHDNIGGPEGKRARTAYTRYQTLELEK 216

  Fly   269 RFLYQKYLSPADRDEIAGGLGLSNAQVITWFQNRRAKLKRD 309
            .|.:.:||:...|.|||..|.||..|:..||||||.|.|:|
 Frog   217 EFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKKD 257

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lblNP_001262805.1 COG5576 206..332 CDD:227863 41/116 (35%)
Homeodomain 252..308 CDD:459649 27/55 (49%)
hoxa5NP_001011405.1 Homeodomain 200..256 CDD:459649 27/55 (49%)

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