DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment lbl and MSX2

DIOPT Version :10

Sequence 1:NP_001262805.1 Gene:lbl / 42541 FlyBaseID:FBgn0008651 Length:410 Species:Drosophila melanogaster
Sequence 2:NP_002440.2 Gene:MSX2 / 4488 HGNCID:7392 Length:267 Species:Homo sapiens


Alignment Length:198 Identity:58/198 - (29%)
Similarity:89/198 - (44%) Gaps:42/198 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   153 PAIIA--------SEDGSSERSQRSSSSNGSTECCSPTQAEKVEKRSQEDRMEVPKKSPEE---- 205
            ||::|        :|..:.||..:.||...|.|      |...:|:..::...:|.:|...    
Human    18 PAVVAGPGPGPGGAEGAAEERRVKVSSLPFSVE------ALMSDKKPPKEASPLPAESASAGATL 76

  Fly   206 QP-----KGASKSSGDTPLDALFQLSTKNFDEEQDPATLNIFATRSNP---------------KK 250
            :|     .||.::....||...|:.::...:..:|.|.......|.:|               |.
Human    77 RPLLLSGHGAREAHSPGPLVKPFETASVKSENSEDGAAWMQEPGRYSPPPRHMSPTTCTLRKHKT 141

  Fly   251 KRKSRTAFTNQQIFELEKRFLYQKYLSPADRDEIAGGLGLSNAQVITWFQNRRAKLKR----DME 311
            .||.||.||..|:..||::|..::|||.|:|.|.:..|.|:..||..||||||||.||    ::|
Human   142 NRKPRTPFTTSQLLALERKFRQKQYLSIAERAEFSSSLNLTETQVKIWFQNRRAKAKRLQEAELE 206

  Fly   312 ELK 314
            :||
Human   207 KLK 209

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lblNP_001262805.1 COG5576 206..332 CDD:227863 44/133 (33%)
Homeodomain 252..308 CDD:459649 28/55 (51%)
MSX2NP_002440.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..71 14/58 (24%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 116..147 5/30 (17%)
Homeodomain 143..199 CDD:459649 28/55 (51%)

Return to query results.
Submit another query.