DRSC/TRiP Functional Genomics Resources

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Protein Alignment lbl and meox1

DIOPT Version :10

Sequence 1:NP_001262805.1 Gene:lbl / 42541 FlyBaseID:FBgn0008651 Length:410 Species:Drosophila melanogaster
Sequence 2:NP_001002450.2 Gene:meox1 / 436723 ZFINID:ZDB-GENE-040718-149 Length:253 Species:Danio rerio


Alignment Length:256 Identity:69/256 - (26%)
Similarity:96/256 - (37%) Gaps:77/256 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    86 VPAPLALINERLQIPLVPNCPPPAALHTFLSPALLHSYEQRLAWDY-----QRQLQEHFQAQAQL 145
            ||||.|...|....|..                  ||..||..|.:     :.:.||..|..|: 
Zfish    62 VPAPHAYPREDRLYPET------------------HSGYQRTEWQFSPCEPRGRGQEPCQGAAE- 107

  Fly   146 LRQMTLNPAIIASEDGSSERSQRSSSSNGSTE-CCSPTQAEKV--EKRSQEDRMEVPKKSPEEQP 207
                     .:.:|..|:...:.:.:..|..| ..||.....|  ||:|.:.:.||         
Zfish   108 ---------AVGAEMDSAGGDRLAGAVTGCLEGDYSPQSVPAVDTEKKSSKRKREV--------- 154

  Fly   208 KGASKSSGDTPLDALFQLSTKNFDEEQDPATLNIFATRSNPKKKRKSRTAFTNQQIFELEKRFLY 272
                                   .:.||.:    |...|| .|.||.|||||.:|:.|||..|.:
Zfish   155 -----------------------TDIQDSS----FKADSN-CKARKERTAFTKEQLRELEAEFTH 191

  Fly   273 QKYLSPADRDEIAGGLGLSNAQVITWFQNRRAKLKR---DMEELKKDVQCEKIPDQSADPN 330
            ..||:...|.|||..|.|:..||..||||||.|.||   .......|::.::: |.:|.|:
Zfish   192 HNYLTRLRRYEIAVNLDLTERQVKVWFQNRRMKWKRVKGGQPASPHDLEADEL-DSAASPS 251

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lblNP_001262805.1 COG5576 206..332 CDD:227863 41/128 (32%)
Homeodomain 252..308 CDD:459649 29/55 (53%)
meox1NP_001002450.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 136..158 6/53 (11%)
Homeodomain 171..227 CDD:459649 29/55 (53%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 226..253 6/27 (22%)

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