Protein Alignment lbl and ro

DIOPT Version :10

• Sequence 1: NP_001262805.1
• Gene: lbl / 42541
• FlyBaseID: FBgn0008651
• Length: 410
• Species: Drosophila melanogaster
• Sequence 2: NP_524521.1
• Gene: ro / 43234
• FlyBaseID: FBgn0003267
• Length: 350
• Species: Drosophila melanogaster
• Alignment Length: 313
• Identity: 74/313 - (23%)
• Similarity: 112/313 - (35%)
• Gaps: 87/313 - (27%)

  Fly    13 VSVGSPSPPPLRSLNMKRLRLLRSPIS----LEHDRQKSSPVRVKSFSIADILGRGHEEDRVE-- 71
            |.:|||...|    .:||...| .||:    |...::.|||.:........:..|..|...::
  Fly     6 VEIGSPDGSP----GIKRSDSL-DPIANTTILSVPQRPSSPRQFFERLYGHLETRSSENGEIDVG 65

  Fly    72 ---KKPERIAIPNALPG--VPAP-LALINERLQIPLVPNCPPPAALHTFLSPALLHSYEQRLAWD 130
               .||.....|....|  |.:| :::.:||..:...|       .:.|...|  ..|.|..:..
  Fly    66 THAHKPPPCDTPYHSDGGSVSSPDISISDERTSLAAYP-------AYDFYGHA--KDYPQHPSQQ 121

  Fly   131 YQRQLQEHF---QAQAQLLRQMTLNPAIIASEDGSSERSQRSSSSNGSTECCSPTQAEKVEKRSQ 192
            :|:....|.   |...|.|..::..|||.|.  |::                :|.
  Fly   122 HQQHHHHHHHPPQLVHQKLSYVSPPPAIAAG--GAA----------------NPV---------- 158

  Fly   193 EDRMEVPKKSPEEQPKGASKSSGDTPLDALFQLSTKNFDEEQDPATLNIFATRSNPK--KKRKSR 255
                 :|...|...|.....|:|                       .:.|..|...|  ::|:.|
  Fly   159 -----LPHAFPAGFPSDPHFSAG-----------------------FSAFLARRRRKEGRQRRQR 195

  Fly   256 TAFTNQQIFELEKRFLYQKYLSPADRDEIAGGLGLSNAQVITWFQNRRAKLKR 308
            |.|:.:|...||..|...:|:|.:.|.|:|..|.|:..|:..||||||||.||
  Fly   196 TTFSTEQTLRLEVEFHRNEYISRSRRFELAETLRLTETQIKIWFQNRRAKDKR 248

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
lbl	NP_001262805.1	COG5576	206..332	CDD:227863	32/105 (30%)
		Homeodomain	252..308	CDD:459649	24/55 (44%)
ro	NP_524521.1	Homeodomain	196..248	CDD:459649	22/51 (43%)