DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment lbl and lbe

DIOPT Version :9

Sequence 1:NP_001262805.1 Gene:lbl / 42541 FlyBaseID:FBgn0008651 Length:410 Species:Drosophila melanogaster
Sequence 2:NP_524435.2 Gene:lbe / 42542 FlyBaseID:FBgn0011278 Length:479 Species:Drosophila melanogaster


Alignment Length:418 Identity:205/418 - (49%)
Similarity:236/418 - (56%) Gaps:100/418 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 RTPSPANSDVSV-GSPSPPPLRSLN---------------------------------------- 27
            |..|||.|::|| |:|||.|.:...                                        
  Fly     8 RPASPAESEISVGGAPSPLPTQHHTHPHSHPHPLQHPRASTIDLLQQQQLLMQHHAAAAAAAAAA 72

  Fly    28 -------------------MKRLRLLRS---------------PISLEHDRQKSSPVRVKSFSIA 58
                               :||||:..|               |....:...||:...|||||||
  Fly    73 ASGLTRSAVGNLPEDYFHPLKRLRMSSSSSEPRDHTPSPPSAVPEPQTNQTTKSAIEGVKSFSIA 137

  Fly    59 DILGRGHE--EDRVEKKPER--IAIPNALPGVPA---------PLALINERLQIPLVPN------ 104
            ||||...:  |:.|...|..  :|.|.:.|..|:         ||.:........|:|:      
  Fly   138 DILGHSEKQREESVSPPPNANLLAPPASRPIAPSGGLLQPRTEPLDVHPAAAAAMLLPSGQIVRP 202

  Fly   105 ----CPPPAALHTFLSPALLHSYEQRLAWDYQRQLQEHFQAQAQLLRQMTLNPAIIASEDGSSER 165
                ..|...:..|:..|||| ||||||.||.|||||||.|||||||.|.:||||||||||||||
  Fly   203 WDHLLGPTMPVRPFIPSALLH-YEQRLALDYHRQLQEHFNAQAQLLRHMGMNPAIIASEDGSSER 266

  Fly   166 SQRSSSSNGSTECCSPTQAEKVEK-RSQEDRMEVPKKSPEEQPKGASKSSGDTPLDALFQLSTKN 229
            ||||||||||||||||.||||:|| .:||...|..||..||||.|:.||:||||||||||::||:
  Fly   267 SQRSSSSNGSTECCSPRQAEKLEKLTTQEGSEEAQKKKSEEQPTGSGKSNGDTPLDALFQMTTKD 331

  Fly   230 FDEEQDPATLNIFATRSNPKKKRKSRTAFTNQQIFELEKRFLYQKYLSPADRDEIAGGLGLSNAQ 294
            |||.||.:.|:||:.|..|||||||||||||.||||||||||||||||||||||||..|||||||
  Fly   332 FDESQDKSHLDIFSNRPQPKKKRKSRTAFTNHQIFELEKRFLYQKYLSPADRDEIAASLGLSNAQ 396

  Fly   295 VITWFQNRRAKLKRDMEELKKDVQCEKI 322
            |||||||||||.|||:||||||....|:
  Fly   397 VITWFQNRRAKQKRDIEELKKDFDSVKV 424

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lblNP_001262805.1 COG5576 206..332 CDD:227863 91/117 (78%)
Homeobox 254..307 CDD:278475 49/52 (94%)
lbeNP_524435.2 Homeobox 356..410 CDD:395001 49/53 (92%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45447393
Domainoid 1 1.000 53 1.000 Domainoid score I4196
eggNOG 1 0.900 - - E1_KOG0488
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1472248at2759
OrthoFinder 1 1.000 - - FOG0002643
OrthoInspector 1 1.000 - - mtm6413
orthoMCL 1 0.900 - - OOG6_107037
Panther 1 1.100 - - P PTHR24336
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R5376
SonicParanoid 1 1.000 - - X3367
1110.780

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