DRSC/TRiP Functional Genomics Resources

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Protein Alignment lbl and Ubx

DIOPT Version :10

Sequence 1:NP_001262805.1 Gene:lbl / 42541 FlyBaseID:FBgn0008651 Length:410 Species:Drosophila melanogaster
Sequence 2:NP_536752.1 Gene:Ubx / 42034 FlyBaseID:FBgn0003944 Length:389 Species:Drosophila melanogaster


Alignment Length:77 Identity:30/77 - (38%)
Similarity:43/77 - (55%) Gaps:6/77 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly   251 KRKSRTAFTNQQIFELEKRFLYQKYLSPADRDEIAGGLGLSNAQVITWFQNRRAKLKRDMEELK- 314
            :|:.|..:|..|..||||.|....||:...|.|:|..|.|:..|:..||||||.|||::::.:| 
  Fly   295 RRRGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHALCLTERQIKIWFQNRRMKLKKEIQAIKE 359

  Fly   315 -----KDVQCEK 321
                 |..|.:|
  Fly   360 LNEQEKQAQAQK 371

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lblNP_001262805.1 COG5576 206..332 CDD:227863 30/77 (39%)
Homeodomain 252..308 CDD:459649 25/55 (45%)
UbxNP_536752.1 Homeodomain 296..352 CDD:459649 25/55 (45%)

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