DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment lbl and mnx2a

DIOPT Version :10

Sequence 1:NP_001262805.1 Gene:lbl / 42541 FlyBaseID:FBgn0008651 Length:410 Species:Drosophila melanogaster
Sequence 2:NP_001009886.2 Gene:mnx2a / 406205 ZFINID:ZDB-GENE-040415-1 Length:309 Species:Danio rerio


Alignment Length:160 Identity:55/160 - (34%)
Similarity:77/160 - (48%) Gaps:32/160 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   250 KKRKSRTAFTNQQIFELEKRFLYQKYLSPADRDEIAGGLGLSNAQVITWFQNRRAKLKRDMEELK 314
            |.|:.|||||:||:.|||.:|...||||...|.|:|..|.|:..||..||||||.|.||..:..:
Zfish   149 KCRRPRTAFTSQQLLELENQFKLNKYLSRPKRFEVATSLMLTETQVKIWFQNRRMKWKRSRKAKE 213

  Fly   315 KDVQCE-------KIPDQSADPNRSHHNHPHYHQQHQHYAHMQSIGSDRDMDKDRCREKEKDKDK 372
            :..|.|       |..::..|.:|.                     |..|.|:|...|:|.::|:
Zfish   214 QAAQLETDGCKSGKRGNKPKDLSRC---------------------SAHDEDEDLDPEEEAEEDE 257

  Fly   373 EEL-RMLKL-MTLMRYSDGKLLYQQPPASY 400
            ||. |.:.: ::|.|:||  .|......||
Zfish   258 EEFRRSINVGVSLPRHSD--FLQHSSALSY 285

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lblNP_001262805.1 COG5576 206..332 CDD:227863 37/88 (42%)
Homeodomain 252..308 CDD:459649 30/55 (55%)
mnx2aNP_001009886.2 Homeodomain 151..207 CDD:459649 30/55 (55%)

Return to query results.
Submit another query.