DRSC/TRiP Functional Genomics Resources

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Protein Alignment lbl and mnx1

DIOPT Version :10

Sequence 1:NP_001262805.1 Gene:lbl / 42541 FlyBaseID:FBgn0008651 Length:410 Species:Drosophila melanogaster
Sequence 2:NP_001009885.1 Gene:mnx1 / 405399 ZFINID:ZDB-GENE-040409-1 Length:311 Species:Danio rerio


Alignment Length:125 Identity:46/125 - (36%)
Similarity:61/125 - (48%) Gaps:14/125 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   250 KKRKSRTAFTNQQIFELEKRFLYQKYLSPADRDEIAGGLGLSNAQVITWFQNRRAKLKRDMEELK 314
            |.|:.|||||:||:.|||.:|...||||...|.|:|..|.|:..||..||||||.|.||..:..:
Zfish   176 KCRRPRTAFTSQQLLELEHQFKLNKYLSRPKRFEVATSLMLTETQVKIWFQNRRMKWKRSKKAKE 240

  Fly   315 KDVQCEKIPDQSADPNRSHHNHPHYHQQHQHYAHMQSIGSDRDMDKDRCREKEKDKDKEE 374
            :..       |.|:..:...||.......:.|..:.|..|:|..|       .:|.|.||
Zfish   241 QAA-------QDAEKQKGKGNHDKMDGLEKDYQKVDSGKSNRIRD-------FRDSDDEE 286

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lblNP_001262805.1 COG5576 206..332 CDD:227863 35/81 (43%)
Homeodomain 252..308 CDD:459649 30/55 (55%)
mnx1NP_001009885.1 Homeodomain 178..234 CDD:459649 30/55 (55%)

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