DRSC/TRiP Functional Genomics Resources

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Protein Alignment lbl and B-H1

DIOPT Version :10

Sequence 1:NP_001262805.1 Gene:lbl / 42541 FlyBaseID:FBgn0008651 Length:410 Species:Drosophila melanogaster
Sequence 2:NP_523387.1 Gene:B-H1 / 32724 FlyBaseID:FBgn0011758 Length:544 Species:Drosophila melanogaster


Alignment Length:323 Identity:75/323 - (23%)
Similarity:118/323 - (36%) Gaps:110/323 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   103 PNCPPPAALHTFLSPALLHSYEQ-------------RLAWDYQRQLQEHFQAQAQLLRQMTLNPA 154
            |...||...||. ..||:|.:.:             .:| .|...:|:|:.|.|          |
  Fly   150 PQPHPPTHPHTH-PHALMHPHGKLGHFPPTAGGNGLNVA-QYAAAMQQHYAAAA----------A 202

  Fly   155 IIASEDGSSERSQRSSSSNGSTECCSPT--------------------------QAEKVEKRSQE 193
            ..|:.:.::..:..::::..:.....|.                          :.|..:..:.:
  Fly   203 AAAARNNAAAAAAAAAAAAAAGVAAPPVDGGVDGGVGLAPPAGGDLDDSSDYHEENEDCDSGNMD 267

  Fly   194 DRMEVPKKSPEEQPKGASKSSGDTPLDALFQLSTKNFDEEQDPATLNIFATRSNPKKKRKSRTAF 258
            |.........::.  |.|..||.|                .|.:.|:        ||:||:||||
  Fly   268 DHSVCSNGGKDDD--GNSVKSGST----------------SDMSGLS--------KKQRKARTAF 306

  Fly   259 TNQQIFELEKRFLYQKYLSPADRDEIAGGLGLSNAQVITWFQNRRAKLKRD-------MEELKKD 316
            |:.|:..|||.|..|||||..:|.|:|..|.||:.||.||:||||.|.||.       :.|....
  Fly   307 TDHQLQTLEKSFERQKYLSVQERQELAHKLDLSDCQVKTWYQNRRTKWKRQTAVGLELLAEAGNF 371

  Fly   317 VQCEKI----PDQSADP-----NRSHHNHPH-----YHQQ------------HQHYAHMQSIG 353
            ...:::    |...|.|     ..:|...||     |::|            :..||.:.|:|
  Fly   372 AAFQRLYGGSPYLGAWPYAAAAGAAHGATPHTNIDIYYRQAAAAAAMQKPLPYNLYAGVPSVG 434

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lblNP_001262805.1 COG5576 206..332 CDD:227863 47/141 (33%)
Homeodomain 252..308 CDD:459649 32/55 (58%)
B-H1NP_523387.1 Homeodomain 300..356 CDD:459649 32/55 (58%)

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