DRSC/TRiP Functional Genomics Resources

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Protein Alignment lbl and HOXD3

DIOPT Version :10

Sequence 1:NP_001262805.1 Gene:lbl / 42541 FlyBaseID:FBgn0008651 Length:410 Species:Drosophila melanogaster
Sequence 2:NP_008829.3 Gene:HOXD3 / 3232 HGNCID:5137 Length:432 Species:Homo sapiens


Alignment Length:224 Identity:59/224 - (26%)
Similarity:92/224 - (41%) Gaps:38/224 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   106 PPPAALHTFLSPALLHSYEQRLAWDYQR---QLQEHFQAQAQLLRQMTLNPAIIASEDGSSERSQ 167
            |||||..:             |..||..   .:|.....:|...:...||.:.:....|:|:...
Human    51 PPPAAASS-------------LDTDYPGSACSIQSSAPLRAPAHKGAELNGSCMRPGTGNSQGGG 102

  Fly   168 RSSSSNGSTECCSPTQAEKVEKRSQEDRMEVPKKS--------PEEQPKGA--SKSSGDTPLDAL 222
            ..|...|       ..:|:...:.......:|..|        |.::|||.  :.||..|....:
Human   103 GGSQPPG-------LNSEQQPPQPPPPPPTLPPSSPTNPGGGVPAKKPKGGPNASSSSATISKQI 160

  Fly   223 F---QLSTKNFDEEQDPATLNIFATRSNP--KKKRKSRTAFTNQQIFELEKRFLYQKYLSPADRD 282
            |   :.|.:|..::...||........:|  ...::.|||:|:.|:.||||.|.:.:||....|.
Human   161 FPWMKESRQNSKQKNSCATAGESCEDKSPPGPASKRVRTAYTSAQLVELEKEFHFNRYLCRPRRV 225

  Fly   283 EIAGGLGLSNAQVITWFQNRRAKLKRDME 311
            |:|..|.|:..|:..||||||.|.|:|.:
Human   226 EMANLLNLTERQIKIWFQNRRMKYKKDQK 254

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lblNP_001262805.1 COG5576 206..332 CDD:227863 39/113 (35%)
Homeodomain 252..308 CDD:459649 25/55 (45%)
HOXD3NP_008829.3 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 43..62 6/23 (26%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 68..197 24/135 (18%)
Antp-type hexapeptide 160..165 1/4 (25%)
Homeodomain 195..251 CDD:459649 25/55 (45%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 253..280 0/2 (0%)
DUF4074 369..430 CDD:463833
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 400..432
Blue background indicates that the domain is not in the aligned region.

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