DRSC/TRiP Functional Genomics Resources

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Protein Alignment lbl and HOXC11

DIOPT Version :10

Sequence 1:NP_001262805.1 Gene:lbl / 42541 FlyBaseID:FBgn0008651 Length:410 Species:Drosophila melanogaster
Sequence 2:NP_055027.1 Gene:HOXC11 / 3227 HGNCID:5123 Length:304 Species:Homo sapiens


Alignment Length:276 Identity:59/276 - (21%)
Similarity:102/276 - (36%) Gaps:57/276 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    74 PERIAIPNALPGVPAPLALINERLQIPLVPNCPPPAALHTFLSPALLHSYEQRLAWDYQRQLQEH 138
            ||...:.:.||..|      :.::..|.....||...:...|.|:        ..|.::......
Human    42 PEFSTVSSFLPQAP------SRQISYPYSAQVPPVREVSYGLEPS--------GKWHHRNSYSSC 92

  Fly   139 FQAQAQLLRQMTLNPAIIASEDGSSERSQRSSSSNGSTECCSPTQAEKVEKRSQEDRMEVPKKS- 202
            :.|..:|:.:..|.|:.:      :|...::..|.|.....|...|......|..::..|..:: 
Human    93 YAAADELMHRECLPPSTV------TEILMKNEGSYGGHHHPSAPHATPAGFYSSVNKNSVLPQAF 151

  Fly   203 --------------PEEQP---KGASKSSGDT-PLDALFQLSTKNFDEEQDPATLNIFATRS--- 246
                          |.|.|   ||.:|...:. |...|...:....:.|.:....|..::.|   
Human   152 DRFFDNAYCGGGDPPAEPPCSGKGEAKGEPEAPPASGLASRAEAGAEAEAEEENTNPSSSGSAHS 216

  Fly   247 -----------NPKKKRKSRTAFTNQQIFELEKRFLYQKYLSPADRDEIAGGLGLSNAQVITWFQ 300
                       |..:.||.|..::..||.|||:.|.:..|::...|.:::..|.|::.||..|||
Human   217 VAKEPAKGAAPNAPRTRKKRCPYSKFQIRELEREFFFNVYINKEKRLQLSRMLNLTDRQVKIWFQ 281

  Fly   301 NRRAKLKRDMEELKKD 316
            |||.|.|:    |.:|
Human   282 NRRMKEKK----LSRD 293

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lblNP_001262805.1 COG5576 206..332 CDD:227863 35/129 (27%)
Homeodomain 252..308 CDD:459649 22/55 (40%)
HOXC11NP_055027.1 DUF3528 42..161 CDD:432284 22/138 (16%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 166..237 14/70 (20%)
Homeodomain 233..289 CDD:459649 22/55 (40%)

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