DRSC/TRiP Functional Genomics Resources

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Protein Alignment lbl and HOXC10

DIOPT Version :10

Sequence 1:NP_001262805.1 Gene:lbl / 42541 FlyBaseID:FBgn0008651 Length:410 Species:Drosophila melanogaster
Sequence 2:NP_059105.2 Gene:HOXC10 / 3226 HGNCID:5122 Length:342 Species:Homo sapiens


Alignment Length:331 Identity:84/331 - (25%)
Similarity:125/331 - (37%) Gaps:84/331 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 PSPANSDVSVGSPS------PPPLRSLNM----KRLRLLRSPISLEHDRQKSS---PVRVKSFSI 57
            ||.:..|.. .|||      |..|..|:.    |....|..|:.    |..||   |..||..::
Human    51 PSLSKRDEG-SSPSLALNTYPSYLSQLDSWGDPKAAYRLEQPVG----RPLSSCSYPPSVKEENV 110

  Fly    58 ADILGRGHEEDRVEKKPERIAIPNALPGVPAPLALINERLQIPL---------------VPNCPP 107
            ..:..   .|.|.:..||.     ||...|.|.:.:.|. ::|:               .|:|  
Human   111 CCMYS---AEKRAKSGPEA-----ALYSHPLPESCLGEH-EVPVPSYYRASPSYSALDKTPHC-- 164

  Fly   108 PAALHTFLSPALLHSYEQRLAWDYQRQLQEHFQAQAQLLRQMTLNPAIIASEDGSSERSQRSSSS 172
             :..:.|.:|     :|||.:          ...:|:.|....|...:...|...|: ||..|.:
Human   165 -SGANDFEAP-----FEQRAS----------LNPRAEHLESPQLGGKVSFPETPKSD-SQTPSPN 212

  Fly   173 NGSTECCSPTQAEKVEKRSQEDRMEVPKKSPEEQPKGASKSSGDTPLDALFQLSTKNFDEEQDPA 237
            ...|                |..:..||.||.|..|..:|::..:|       .|.:.:.:::..
Human   213 EIKT----------------EQSLAGPKGSPSESEKERAKAADSSP-------DTSDNEAKEEIK 254

  Fly   238 TLNIFATRSNPKKKRKSRTAFTNQQIFELEKRFLYQKYLSPADRDEIAGGLGLSNAQVITWFQNR 302
            ..|........|..||.|..:|..|..||||.||:..||:...|.||:..:.|::.||..|||||
Human   255 AENTTGNWLTAKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISKTINLTDRQVKIWFQNR 319

  Fly   303 RAKLKR 308
            |.|||:
Human   320 RMKLKK 325

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lblNP_001262805.1 COG5576 206..332 CDD:227863 34/103 (33%)
Homeodomain 252..308 CDD:459649 27/55 (49%)
HOXC10NP_059105.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..29
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 187..271 21/107 (20%)
Homeodomain 269..325 CDD:459649 27/55 (49%)
Blue background indicates that the domain is not in the aligned region.

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