DRSC/TRiP Functional Genomics Resources

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Protein Alignment lbl and CG11085

DIOPT Version :10

Sequence 1:NP_001262805.1 Gene:lbl / 42541 FlyBaseID:FBgn0008651 Length:410 Species:Drosophila melanogaster
Sequence 2:NP_572815.3 Gene:CG11085 / 32213 FlyBaseID:FBgn0030408 Length:295 Species:Drosophila melanogaster


Alignment Length:280 Identity:71/280 - (25%)
Similarity:101/280 - (36%) Gaps:61/280 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    53 KSFSIADILGRGHEEDRVEKKPERIAIPNALPGVPAPLALINERLQIPLVPNCPPPAALHTFLSP 117
            |||.|.|:||     |.:.::.           ..:.|.|.|:...|.:.....|.:........
  Fly     5 KSFLIRDLLG-----DLINRRQ-----------TDSELELSNDDSDIDIEDRSTPDSTAAGCQQE 53

  Fly   118 ALLHSYEQRLAWDYQRQLQEHFQAQAQLLRQMTLNPAIIASEDGSSERSQRSSSSNGSTECCSPT 182
            .||..:.:|..        .|.::..:.....|..|       ||...|.......|.....|..
  Fly    54 LLLSHHHRRFT--------HHDESSVESCLSATRGP-------GSGTGSGGGGGGGGGGGVASGL 103

  Fly   183 QAEKVEKRSQEDRMEVPKK--SPEEQPKGAS--KSSGDTP---LDALFQLSTKNFDEEQDPATLN 240
            .|...........:.....  :.:....|.|  .|.|.|.   .:...|||              
  Fly   104 SAAAAAAGVAAGLLAAAASGANGDRDANGGSGPGSGGGTSGGYAEHKLQLS-------------- 154

  Fly   241 IFATRSNPKKKRKSRTAFTNQQIFELEKRFLYQKYLSPADRDEIAGGLGLSNAQVITWFQNRRAK 305
                 .:.:|.|:.|||||:.|:..||::|..|||||.|||.::|..|.||..||.||:||||.|
  Fly   155 -----KSGRKPRRRRTAFTHAQLAYLERKFRCQKYLSVADRSDVAETLNLSETQVKTWYQNRRTK 214

  Fly   306 LKRD----MEELKKDVQCEK 321
            .||.    :|:|:.....||
  Fly   215 WKRQNQLRLEQLRHQATMEK 234

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lblNP_001262805.1 COG5576 206..332 CDD:227863 46/125 (37%)
Homeodomain 252..308 CDD:459649 31/55 (56%)
CG11085NP_572815.3 Homeodomain 161..217 CDD:459649 31/55 (56%)

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