DRSC/TRiP Functional Genomics Resources

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Protein Alignment lbl and HOXC4

DIOPT Version :10

Sequence 1:NP_001262805.1 Gene:lbl / 42541 FlyBaseID:FBgn0008651 Length:410 Species:Drosophila melanogaster
Sequence 2:NP_055435.2 Gene:HOXC4 / 3221 HGNCID:5126 Length:264 Species:Homo sapiens


Alignment Length:186 Identity:56/186 - (30%)
Similarity:78/186 - (41%) Gaps:23/186 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   174 GSTECCSPTQA-----EKVEKRSQEDRMEVPKKSPEEQPKGASKSSGDTPLDALFQLSTKNFDEE 233
            |::....|.||     ||.:...:...:.....||...|...|:.:.|.|..|.         .:
Human    76 GNSRGHGPAQAGHHHPEKSQSLCEPAPLSGASASPSPAPPACSQPAPDHPSSAA---------SK 131

  Fly   234 QD---PATLNIFATRSNPK----KKRKSRTAFTNQQIFELEKRFLYQKYLSPADRDEIAGGLGLS 291
            |.   |....|..:..||.    :.::||||:|.||:.||||.|.|.:||:...|.|||..|.||
Human   132 QPIVYPWMKKIHVSTVNPNYNGGEPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRIEIAHSLCLS 196

  Fly   292 NAQVITWFQNRRAKLKRDMEELKKDVQCEKIPDQSADPNRSHHNHPHYHQQHQHYA 347
            ..|:..||||||.|.|:|  ....:.:....|...|.|:......|...:.|...|
Human   197 ERQIKIWFQNRRMKWKKD--HRLPNTKVRSAPPAGAAPSTLSAATPGTSEDHSQSA 250

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lblNP_001262805.1 COG5576 206..332 CDD:227863 45/132 (34%)
Homeodomain 252..308 CDD:459649 30/55 (55%)
HOXC4NP_055435.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 19..130 13/62 (21%)
Antp-type hexapeptide 135..140 1/4 (25%)
Homeodomain 157..213 CDD:459649 30/55 (55%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 214..264 7/39 (18%)

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