DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment lbl and HOXB9

DIOPT Version :10

Sequence 1:NP_001262805.1 Gene:lbl / 42541 FlyBaseID:FBgn0008651 Length:410 Species:Drosophila melanogaster
Sequence 2:NP_076922.1 Gene:HOXB9 / 3219 HGNCID:5120 Length:250 Species:Homo sapiens


Alignment Length:305 Identity:76/305 - (24%)
Similarity:107/305 - (35%) Gaps:98/305 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 LEHDRQKSSPVRVKSFSIADILGRGHEEDRVEKKPERIAIPNA--LPGVP------APLALINER 96
            :.|:.:.:.|.:..|...|.....||        .|.:..|:.  .|..|      |||: .:..
Human    16 ISHESEDAPPAKFPSGQYASSRQPGH--------AEHLEFPSCSFQPKAPVFGASWAPLS-PHAS 71

  Fly    97 LQIPLV------PNCPPPAA---LHTFLSPALLHSYEQRLAWDYQRQLQEHFQAQAQLLRQMTLN 152
            ..:|.|      |...|||.   |.|:|.||             .|......|.||.:..:..|.
Human    72 GSLPSVYHPYIQPQGVPPAESRYLRTWLEPA-------------PRGEAAPGQGQAAVKAEPLLG 123

  Fly   153 PAIIASEDGSSERSQRSSS------SN-----GSTECCSPTQAEKVEKRSQEDRMEVPKKSPEEQ 206
            ......:.|:.|.|..:|:      ||     |..:.|          ...||:         |:
Human   124 APGELLKQGTPEYSLETSAGREAVLSNQRPGYGDNKIC----------EGSEDK---------ER 169

  Fly   207 PKGASKSSGDTPLDALFQLSTKNFDEEQDPATLNIFATRSNPKKKRKSRTAFTNQQIFELEKRFL 271
            |                         :|...:.|....||:    ||.|..:|..|..||||.||
Human   170 P-------------------------DQTNPSANWLHARSS----RKKRCPYTKYQTLELEKEFL 205

  Fly   272 YQKYLSPADRDEIAGGLGLSNAQVITWFQNRRAKLKRDMEELKKD 316
            :..||:...|.|:|..|.||..||..||||||.|:|:..:|..|:
Human   206 FNMYLTRDRRHEVARLLNLSERQVKIWFQNRRMKMKKMNKEQGKE 250

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lblNP_001262805.1 COG5576 206..332 CDD:227863 36/111 (32%)
Homeodomain 252..308 CDD:459649 28/55 (51%)
HOXB9NP_076922.1 Hox9_act 1..172 CDD:461369 41/221 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 21..47 6/33 (18%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 149..182 10/76 (13%)
Homeodomain 186..242 CDD:459649 28/55 (51%)

Return to query results.
Submit another query.