DRSC/TRiP Functional Genomics Resources

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Protein Alignment lbl and HOXA1

DIOPT Version :10

Sequence 1:NP_001262805.1 Gene:lbl / 42541 FlyBaseID:FBgn0008651 Length:410 Species:Drosophila melanogaster
Sequence 2:NP_005513.2 Gene:HOXA1 / 3198 HGNCID:5099 Length:335 Species:Homo sapiens


Alignment Length:256 Identity:71/256 - (27%)
Similarity:90/256 - (35%) Gaps:78/256 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    88 APLALINERLQIPLVPNCPPPAALHTFLSPALLHSYEQRLAWDYQRQLQEHFQAQAQLLRQMTLN 152
            :|.||..|.......|.|.|........||.:.|.:              |.|..|   .....:
Human   109 SPYALNQEADVSGGYPQCAPAVYSGNLSSPMVQHHH--------------HHQGYA---GGAVGS 156

  Fly   153 PAIIASEDGSSERSQRSSSSNGSTECCSPTQAEKVEKRSQEDRMEVPKKSPEEQPKGASKSSGDT 217
            |..|....|...:|...::.|.|   .||..|...|          ..:||      ||::|   
Human   157 PQYIHHSYGQEHQSLALATYNNS---LSPLHASHQE----------ACRSP------ASETS--- 199

  Fly   218 PLDALFQLSTKNFDEEQDPA-TLNIFATRSNPKKKRK------------SRTAFTNQQIFELEKR 269
                             .|| |.:....:.||.|..|            .||.||.:|:.||||.
Human   200 -----------------SPAQTFDWMKVKRNPPKTGKVGEYGYLGQPNAVRTNFTTKQLTELEKE 247

  Fly   270 FLYQKYLSPADRDEIAGGLGLSNAQVITWFQNRRAK-LKRDMEELKKDVQCEKIPDQSADP 329
            |.:.|||:.|.|.|||..|.|:..||..||||||.| .||:.|.|        :|...|.|
Human   248 FHFNKYLTRARRVEIAASLQLNETQVKIWFQNRRMKQKKREKEGL--------LPISPATP 300

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lblNP_001262805.1 COG5576 206..332 CDD:227863 46/138 (33%)
Homeodomain 252..308 CDD:459649 30/68 (44%)
HOXA1NP_005513.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 61..80
Interaction with OGT. /evidence=ECO:0000250|UniProtKB:P09022 75..203 29/149 (19%)
COG5576 176..>286 CDD:227863 47/148 (32%)
Antp-type hexapeptide 204..209 1/4 (25%)
Homeodomain 233..286 CDD:459649 29/52 (56%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 281..335 9/28 (32%)
Blue background indicates that the domain is not in the aligned region.

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