DRSC/TRiP Functional Genomics Resources

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Protein Alignment lbl and HMX1

DIOPT Version :10

Sequence 1:NP_001262805.1 Gene:lbl / 42541 FlyBaseID:FBgn0008651 Length:410 Species:Drosophila melanogaster
Sequence 2:NP_061815.2 Gene:HMX1 / 3166 HGNCID:5017 Length:348 Species:Homo sapiens


Alignment Length:313 Identity:74/313 - (23%)
Similarity:101/313 - (32%) Gaps:108/313 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    46 KSSPVRVKSFSIADIL------------GRGHEEDRVE--KKPE---------------RIAIPN 81
            :::|.|..||.|.::|            |.|..||..|  ..||               |..:..
Human    10 RATPARASSFLIENLLAAEAKGAGRATQGDGSREDEEEDDDDPEDEDAEQARRRRLQRRRQLLAG 74

  Fly    82 ALPGVPAPLALINERLQIPLVPNC------PPPAALHTFLSPALLHSYEQRLAWDYQRQLQEHFQ 140
            ..||..|       |.:..|.|..      |||..     .|...........| |.|   .|..
Human    75 TGPGGEA-------RARALLGPGALGLGPRPPPGP-----GPPFALGCGGAARW-YPR---AHGG 123

  Fly   141 AQAQLLRQMTLNPAIIASEDGSSERSQRSSSSNGSTECCSP-------TQAEKVEKRSQ------ 192
            ....|            |.|.|...|..:....|..|...|       .|.|..|..::      
Human   124 YGGGL------------SPDTSDRDSPETGEEMGRAEGAWPRGPGPGAVQREAAELAARGPAAGT 176

  Fly   193 EDRMEVPKKSPEEQPKGASKSSGDTPLDALFQLSTKNFDEEQDPATLNIFATRSNPKKKRKSRTA 257
            |:..|:     .|.|..|.::.|...:..                           .:|:|:||.
Human   177 EEASEL-----AEVPAAAGETRGGVGVGG---------------------------GRKKKTRTV 209

  Fly   258 FTNQQIFELEKRFLYQKYLSPADRDEIAGGLGLSNAQVITWFQNRRAKLKRDM 310
            |:..|:|:||..|..::|||.|:|..:|..|.|:..||..||||||.|.||.:
Human   210 FSRSQVFQLESTFDLKRYLSSAERAGLAASLQLTETQVKIWFQNRRNKWKRQL 262

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lblNP_001262805.1 COG5576 206..332 CDD:227863 32/105 (30%)
Homeodomain 252..308 CDD:459649 26/55 (47%)
HMX1NP_061815.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 29..203 39/233 (17%)
Homeodomain 206..260 CDD:459649 25/53 (47%)
HMX family specific domain 1 263..273 74/313 (24%)
HMX family specific domain 2 276..289
Blue background indicates that the domain is not in the aligned region.

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