Protein Alignment lbl and Hoxc5

DIOPT Version :10

• Sequence 1: NP_001262805.1
• Gene: lbl / 42541
• FlyBaseID: FBgn0008651
• Length: 410
• Species: Drosophila melanogaster
• Sequence 2: NP_001101586.1
• Gene: Hoxc5 / 315341
• RGDID: 1307584
• Length: 222
• Species: Rattus norvegicus
• Alignment Length: 143
• Identity: 44/143 - (30%)
• Similarity: 66/143 - (46%)
• Gaps: 32/143 - (22%)

  Fly   184 AEKVEKRSQEDRMEVPKKSPEE-----QPKGASKSSGDTPLDALFQLSTKNFDEEQDPATLNIF- 242
            ::|..:.:.|:|.:...:..||     ||.|.|                      |.||...|:
  Rat   100 SQKAARPALEERAKSSGEIKEEQAQTGQPAGLS----------------------QPPAPPQIYP 142

  Fly   243 -ATR---SNPKKKRKSRTAFTNQQIFELEKRFLYQKYLSPADRDEIAGGLGLSNAQVITWFQNRR 303
             .|:   |:....::|||::|..|..||||.|.:.:||:...|.|||..|.|:..|:..||||||
  Rat   143 WMTKLHMSHETDGKRSRTSYTRYQTLELEKEFHFNRYLTRRRRIEIANNLCLNERQIKIWFQNRR 207

  Fly   304 AKLKRDMEELKKD 316
            .|.|:|.:...|:
  Rat   208 MKWKKDSKMKSKE 220

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
lbl	NP_001262805.1	COG5576	206..332	CDD:227863	39/116 (34%)
		Homeodomain	252..308	CDD:459649	26/55 (47%)
Hoxc5	NP_001101586.1	Homeodomain	156..212	CDD:459649	26/55 (47%)