DRSC/TRiP Functional Genomics Resources

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Protein Alignment lbl and nkx2.7

DIOPT Version :10

Sequence 1:NP_001262805.1 Gene:lbl / 42541 FlyBaseID:FBgn0008651 Length:410 Species:Drosophila melanogaster
Sequence 2:NP_571494.1 Gene:nkx2.7 / 30694 ZFINID:ZDB-GENE-990415-179 Length:269 Species:Danio rerio


Alignment Length:186 Identity:58/186 - (31%)
Similarity:88/186 - (47%) Gaps:35/186 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   144 QLLRQMTLNPAIIASEDGSSERSQRSSSSNGSTECCSPTQAEKVEKRSQEDRMEVPKKS-PEEQP 207
            :|.:|..|||.:....:..|...|     :...:|...|.:..:      |.:..|:|. |.||.
Zfish    18 KLEQQQALNPGVFMGVEQDSVPLQ-----SLQLQCMQNTLSRSL------DLLYSPEKGIPGEQV 71

  Fly   208 K----GASKSSGDTP----LDALFQLSTKNFDEEQDPATLNIFAT------RSNPKK--KRKSRT 256
            |    ...:||..:|    :||       |.:....|.|.:.:::      |..||:  :||.|.
Zfish    72 KCDDFDIVRSSCGSPTEEEMDA-------NEETSMCPFTDSSYSSKNGETLREKPKQRLRRKPRV 129

  Fly   257 AFTNQQIFELEKRFLYQKYLSPADRDEIAGGLGLSNAQVITWFQNRRAKLKRDMEE 312
            .|:..|:||||:||..|:|||..:||.:|..|.|::.||..||||||.|.||..::
Zfish   130 LFSQTQVFELERRFKQQRYLSAPERDHLALALKLTSTQVKIWFQNRRYKCKRQRQD 185

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lblNP_001262805.1 COG5576 206..332 CDD:227863 44/123 (36%)
Homeodomain 252..308 CDD:459649 29/55 (53%)
nkx2.7NP_571494.1 COG5576 87..210 CDD:227863 39/106 (37%)
Homeodomain 125..181 CDD:459649 29/55 (53%)

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