Protein Alignment lbl and Nkx3-1

DIOPT Version :10

• Sequence 1: NP_001262805.1
• Gene: lbl / 42541
• FlyBaseID: FBgn0008651
• Length: 410
• Species: Drosophila melanogaster
• Sequence 2: NP_001029316.1
• Gene: Nkx3-1 / 305999
• RGDID: 1305369
• Length: 238
• Species: Rattus norvegicus
• Alignment Length: 184
• Identity: 57/184 - (30%)
• Similarity: 89/184 - (48%)
• Gaps: 16/184 - (8%)

  Fly   179 CSPTQAEKVEKRSQEDRMEVPKKSPEEQP---KGASKSSGDTPLDALFQLSTKNFDEEQDPATLN 240
            |.|.  .|.:..|:.|..|....:.|:.|   ...:::..:|..||.|:  |...|.|..|...:
  Rat    57 CQPD--PKRDSASELDEAEGSSVTLEDPPGIRSSPTETRAETESDAHFE--TYLLDCEHTPVLSS 117

  Fly   241 IFATRSNPKKKRKSRTAFTNQQIFELEKRFLYQKYLSPADRDEIAGGLGLSNAQVITWFQNRRAK 305
            .......|:|  :||.||::.|:.|||::|.:|||||..:|..:|..|.|:..||..||||||.|
  Rat   118 APQVTKQPQK--RSRAAFSHTQVIELERKFSHQKYLSAPERAHLAKNLKLTETQVKIWFQNRRYK 180

  Fly   306 LKRDMEELKKDV-QCEKIPDQS----ADPNRSHHNHPHYHQQHQHYAHMQSIGS 354
            .||  .:|.:|: ..||....|    .|.:.|..:....:..:.:|.::..:||
  Rat   181 TKR--RQLSEDLGVLEKNSTLSLPTLKDDSLSRASLVSVYASYPYYPYLYCLGS 232

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
lbl	NP_001262805.1	COG5576	206..332	CDD:227863	46/133 (35%)
		Homeodomain	252..308	CDD:459649	27/55 (49%)
Nkx3-1	NP_001029316.1	Homeodomain	127..183	CDD:459649	28/57 (49%)