DRSC/TRiP Functional Genomics Resources

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Protein Alignment lbl and hoxb8b

DIOPT Version :10

Sequence 1:NP_001262805.1 Gene:lbl / 42541 FlyBaseID:FBgn0008651 Length:410 Species:Drosophila melanogaster
Sequence 2:NP_571256.1 Gene:hoxb8b / 30420 ZFINID:ZDB-GENE-980526-291 Length:247 Species:Danio rerio


Alignment Length:98 Identity:36/98 - (36%)
Similarity:49/98 - (50%) Gaps:8/98 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly   232 EEQDPATLNIFA-TRSNPKKKRKSRTAFTNQQIFELEKRFLYQKYLSPADRDEIAGGLGLSNAQV 295
            |..:|.|..:|. .|.....:|:.|..::..|..||||.||:..||:...|.|::..|.|:..||
Zfish   125 ESAEPCTAQLFPWMRPQATGRRRGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALALTERQV 189

  Fly   296 ITWFQNRRAKLKRDMEELKKDVQCEKIPDQSAD 328
            ..||||||.|.|:   |..||    |.|...|:
Zfish   190 KIWFQNRRMKWKK---EHNKD----KFPSSKAE 215

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lblNP_001262805.1 COG5576 206..332 CDD:227863 36/98 (37%)
Homeodomain 252..308 CDD:459649 24/55 (44%)
hoxb8bNP_571256.1 Antp-type hexapeptide 134..139 1/4 (25%)
Homeodomain 146..202 CDD:459649 24/55 (44%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 201..247 7/22 (32%)

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