DRSC/TRiP Functional Genomics Resources

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Protein Alignment lbl and hoxb1b

DIOPT Version :10

Sequence 1:NP_001262805.1 Gene:lbl / 42541 FlyBaseID:FBgn0008651 Length:410 Species:Drosophila melanogaster
Sequence 2:NP_571217.2 Gene:hoxb1b / 30374 ZFINID:ZDB-GENE-980526-290 Length:307 Species:Danio rerio


Alignment Length:154 Identity:51/154 - (33%)
Similarity:68/154 - (44%) Gaps:38/154 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   204 EEQPKGASKSSGDTPLDALFQLSTKNFDEEQDPATLNI--------FATRSNPKKKRK------- 253
            |.:|.|....|       .:|:|.   |.:.|..| ||        ...:.||.|..|       
Zfish   152 EPEPHGYGSFS-------KYQVSP---DSDSDSKT-NIKQAPTFDWMKVKRNPPKTVKVAEYGIH 205

  Fly   254 -----SRTAFTNQQIFELEKRFLYQKYLSPADRDEIAGGLGLSNAQVITWFQNRRAKLKRDMEE- 312
                 .||.||.:|:.||||.|.:.|||:.|.|.|:|..|.|:..||..||||||.|.|:..:| 
Zfish   206 GQQNIIRTNFTTKQLTELEKEFHFNKYLTRARRVEVAATLELNETQVKIWFQNRRMKQKKREKEG 270

  Fly   313 ----LKKDVQCEKIPDQSADPNRS 332
                :|:...|..  .|:||.:.|
Zfish   271 TAPVIKRVTLCSS--GQNADHSTS 292

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lblNP_001262805.1 COG5576 206..332 CDD:227863 49/150 (33%)
Homeodomain 252..308 CDD:459649 29/67 (43%)
hoxb1bNP_571217.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 159..178 6/29 (21%)
Antp-type hexapeptide 183..188 0/4 (0%)
Homeodomain 212..265 CDD:459649 28/52 (54%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 265..307 7/30 (23%)

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