DRSC/TRiP Functional Genomics Resources

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Protein Alignment lbl and Dlx4

DIOPT Version :10

Sequence 1:NP_001262805.1 Gene:lbl / 42541 FlyBaseID:FBgn0008651 Length:410 Species:Drosophila melanogaster
Sequence 2:NP_001100510.1 Gene:Dlx4 / 303469 RGDID:1308744 Length:238 Species:Rattus norvegicus


Alignment Length:274 Identity:62/274 - (22%)
Similarity:100/274 - (36%) Gaps:96/274 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    78 AIPNALPGVP---------APLALINERLQIPLVPNCPPPAALHTFLSPALLHS--YEQRLAWDY 131
            ::|..|||:.         ||.:.:....|:.|.|.        |..||.|..|  |...|::.|
  Rat     3 SLPCPLPGLGPSNVVFPDLAPASSVVAAYQLGLSPG--------TAASPDLSFSQTYGHLLSYSY 59

  Fly   132 QRQLQEHFQAQAQLLRQMTLNPAIIASEDGSSERSQRSSSSNGSTECCSPTQ-AEKVEKRSQEDR 195
            .                   .||    ..|.|..|.:..|:..|.....||: .:::|..|::..
  Rat    60 P-------------------GPA----TPGDSYLSSQQQSAAPSRPFHQPTEHPQELEAESEKLA 101

  Fly   196 MEVPKKSPEEQPKGASKSSGDTPLDALFQLSTKNFDEEQDPATLNIFATRSNPKKKRKSRTAFTN 260
            :.:....|                                          |..:|.||.||.:::
  Rat   102 LSLEPSQP------------------------------------------SLTRKLRKPRTIYSS 124

  Fly   261 QQIFELEKRFLYQKYLSPADRDEIAGGLGLSNAQVITWFQNRRAK----LKRDMEELKKDVQCEK 321
            .|:..|.:||.:.:||:..:|.::|..|||:..||..||||:|:|    ||:...||::|.    
  Rat   125 LQLQHLNQRFQHTQYLALPERAQLAAQLGLTQTQVKIWFQNKRSKYKKLLKQSSGELEEDF---- 185

  Fly   322 IPDQSADPNRSHHN 335
               ....|:.|.|:
  Rat   186 ---SGRPPSLSPHS 196

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lblNP_001262805.1 COG5576 206..332 CDD:227863 31/129 (24%)
Homeodomain 252..308 CDD:459649 24/59 (41%)
Dlx4NP_001100510.1 Homeodomain 116..172 CDD:459649 23/55 (42%)

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