DRSC/TRiP Functional Genomics Resources

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Protein Alignment lbl and hoxb4a

DIOPT Version :10

Sequence 1:NP_001262805.1 Gene:lbl / 42541 FlyBaseID:FBgn0008651 Length:410 Species:Drosophila melanogaster
Sequence 2:NP_571193.1 Gene:hoxb4a / 30340 ZFINID:ZDB-GENE-990415-105 Length:246 Species:Danio rerio


Alignment Length:259 Identity:73/259 - (28%)
Similarity:99/259 - (38%) Gaps:56/259 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    92 LINERLQIPLVPNCPPPAALHTFLSPALLHSYEQRLAWDY-QRQLQEHFQAQAQLLRQMTLNPAI 155
            |||.....|..|.|               ..|.|.   || .....:::.||.|       :|  
Zfish     7 LINSNYVDPKFPPC---------------EEYSQS---DYLPSHSPDYYSAQRQ-------DP-- 44

  Fly   156 IASEDGSSERSQRSSSSNGS-TECCSPTQ-AEKVEKRSQ---EDRMEVPKKSPEEQPKGASKS-- 213
              |....|...|||..::.. :.|..|.| |..:..|..   ...:..|...|.......:.|  
Zfish    45 --SFQHESIYHQRSGCADPPYSSCQGPGQPAAVISPRGHVLPTTALSTPLPEPSHHCDSVTPSPP 107

  Fly   214 --SGDTPLDALFQLSTKNFDEEQDPAT--------LNIFATRSNPKKKRKSRTAFTNQQIFELEK 268
              .|.||...    :|......:||..        :||.:...:..:.::||||:|.||:.||||
Zfish   108 PACGQTPTSQ----NTSTVSSRKDPVVYPWMKKVHVNIVSPNYSGGEPKRSRTAYTRQQVLELEK 168

  Fly   269 RFLYQKYLSPADRDEIAGGLGLSNAQVITWFQNRRAKLKRDMEELKKDVQCEKIPDQSADPNRS 332
            .|.|.:||:...|.|||..|.||..|:..||||||.|.|:|.:     :...||...||..|.|
Zfish   169 EFHYNRYLTRRRRVEIAHTLCLSERQIKIWFQNRRMKWKKDHK-----LPNTKIRSNSASTNSS 227

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lblNP_001262805.1 COG5576 206..332 CDD:227863 46/137 (34%)
Homeodomain 252..308 CDD:459649 30/55 (55%)
hoxb4aNP_571193.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 23..125 25/119 (21%)
Antp-type hexapeptide 130..135 0/4 (0%)
Homeodomain 152..208 CDD:459649 30/55 (55%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 210..246 6/23 (26%)

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