Protein Alignment lbl and Cdx4

DIOPT Version :10

• Sequence 1: NP_001262805.1
• Gene: lbl / 42541
• FlyBaseID: FBgn0008651
• Length: 410
• Species: Drosophila melanogaster
• Sequence 2: NP_001100412.1
• Gene: Cdx4 / 302400
• RGDID: 1561529
• Length: 288
• Species: Rattus norvegicus
• Alignment Length: 123
• Identity: 40/123 - (32%)
• Similarity: 58/123 - (47%)
• Gaps: 19/123 - (15%)

  Fly   209 GASKSSGDTPLDALFQLSTKNFDEEQDPATLNIFATRSNP--------------KKKRKSRTAFT 259
            |.:.:.|..| ||..: |..:.|........:...:|.:|              :.|.|.|..:|
  Rat   123 GGASNGGSLP-DAASE-SLVSIDSGTSGGATSPSRSRHSPYAWMRKTVQVTGKTRTKEKYRVVYT 185

  Fly   260 NQQIFELEKRFLYQKYLSPADRDEIAGGLGLSNAQVITWFQNRRAKLKRDMEELKKDV 317
            :.|..||||.|...:|::...:.|:|..||||..||..|||||||| :|.|  :||.:
  Rat   186 DHQRLELEKEFHCNRYITIRRKSELAVNLGLSERQVKIWFQNRRAK-ERKM--IKKKI 240

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
lbl	NP_001262805.1	COG5576	206..332	CDD:227863	40/123 (33%)
		Homeodomain	252..308	CDD:459649	26/55 (47%)
Cdx4	NP_001100412.1	Caudal_act	13..174	CDD:461413	9/52 (17%)
		Homeodomain	179..234	CDD:459649	26/55 (47%)