Protein Alignment lbl and Hoxd4

DIOPT Version :10

• Sequence 1: NP_001262805.1
• Gene: lbl / 42541
• FlyBaseID: FBgn0008651
• Length: 410
• Species: Drosophila melanogaster
• Sequence 2: NP_001099355.1
• Gene: Hoxd4 / 288153
• RGDID: 1309690
• Length: 251
• Species: Rattus norvegicus
• Alignment Length: 195
• Identity: 53/195 - (27%)
• Similarity: 73/195 - (37%)
• Gaps: 62/195 - (31%)

  Fly   174 GSTECCSPTQAEKVEKRSQEDRMEVPKKSPEEQPKGASKSSGDTPLDALFQLSTKNFDEEQDPAT 238
            |:..|..||                   .|::.|.|.          ||.|           ||.
  Rat   106 GARACSQPT-------------------GPKQPPPGT----------ALKQ-----------PAV 130

  Fly   239 L-----NIFATRSNPK----KKRKSRTAFTNQQIFELEKRFLYQKYLSPADRDEIAGGLGLSNAQ 294
            :     .:.....||.    :.::||||:|.||:.||||.|.:.:||:...|.|||..|.||..|
  Rat   131 VYPWMKKVHVNSVNPNYTGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQ 195

  Fly   295 VITWFQNRRAKLKRDMEELKKDVQCEKIPDQSADPNRSHHNHPHYHQQHQHYAHMQSIGSDRDMD 359
            :..||||||.|.|:|          .|:|:..   .||..:............|:|.:..|...|
  Rat   196 IKIWFQNRRMKWKKD----------HKLPNTK---GRSSSSSSSCSSSAAPSQHLQPMAKDHHTD 247

  Fly   360  359
              Rat   248  247

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
lbl	NP_001262805.1	COG5576	206..332	CDD:227863	42/134 (31%)
		Homeodomain	252..308	CDD:459649	29/55 (53%)
Hoxd4	NP_001099355.1	Homeodomain	153..209	CDD:459649	29/55 (53%)