Protein Alignment lbl and Hoxb9

DIOPT Version :10

• Sequence 1: NP_001262805.1
• Gene: lbl / 42541
• FlyBaseID: FBgn0008651
• Length: 410
• Species: Drosophila melanogaster
• Sequence 2: NP_001093967.1
• Gene: Hoxb9 / 287647
• RGDID: 1306158
• Length: 250
• Species: Rattus norvegicus
• Alignment Length: 287
• Identity: 68/287 - (23%)
• Similarity: 106/287 - (36%)
• Gaps: 62/287 - (21%)

  Fly    40 LEHDRQKSSPVRVKSFSIADILGRGHEEDRVEKKPERIAIPNALPGVPAPLALINERLQIPLVPN 104
            :.|:.:.:.|.:..|...|:....||        .|.:..|:......||   :......||.|:
  Rat    16 ISHESEDAPPAKFPSGQYANPRQPGH--------AEHLDFPSCSFQPKAP---VFGASWAPLSPH 69

  Fly   105 CPP--PAALHTFLSPALLHSYEQRLAWDYQRQLQEHF--------QAQAQLLRQMTLNPAIIASE 159
            ...  |:..|.:|.|....:.|.|    |.|...|..        |.||.:..:..|.......:
  Rat    70 ASGSLPSVYHPYLQPQGAPAAESR----YLRTWLEPAPRAEAAPGQGQAAVKAEPLLGAPGELLK 130

  Fly   160 DGSSERSQRSSSSNGSTECCSPTQAEKVEKRSQEDRMEVPKKSPEEQPKGASKSSGDTPLDALFQ 224
            .|:.|.|..:|:..         :|....:|:                     ..||..:
  Rat   131 QGTPEYSLETSAGR---------EAVLSNQRA---------------------GYGDNKI----- 160

  Fly   225 LSTKNFDEEQDPATLNIFATRSNPKKKRKSRTAFTNQQIFELEKRFLYQKYLSPADRDEIAGGLG 289
              .:..::::.|...|..|...:.:..||.|..:|..|..||||.||:..||:...|.|:|..|.
  Rat   161 --CEGSEDKERPDQTNPSANWLHARSSRKKRCPYTKYQTLELEKEFLFNMYLTRDRRHEVARLLN 223

  Fly   290 LSNAQVITWFQNRRAKLKRDMEELKKD 316
            ||..||..||||||.|:|:..:|..|:
  Rat   224 LSERQVKIWFQNRRMKMKKMNKEQGKE 250

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
lbl	NP_001262805.1	COG5576	206..332	CDD:227863	36/111 (32%)
		Homeodomain	252..308	CDD:459649	28/55 (51%)
Hoxb9	NP_001093967.1	Hox9_act	1..172	CDD:461369	35/207 (17%)
		Homeodomain	186..242	CDD:459649	28/55 (51%)