DRSC/TRiP Functional Genomics Resources

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Protein Alignment lbl and GSX1

DIOPT Version :10

Sequence 1:NP_001262805.1 Gene:lbl / 42541 FlyBaseID:FBgn0008651 Length:410 Species:Drosophila melanogaster
Sequence 2:NP_663632.1 Gene:GSX1 / 219409 HGNCID:20374 Length:264 Species:Homo sapiens


Alignment Length:267 Identity:75/267 - (28%)
Similarity:100/267 - (37%) Gaps:74/267 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    53 KSFSIADILGRGHEEDRVEKKPERIAIPNALPGVPAPLALINERLQIPLVPNCPPPAALHTFLSP 117
            :||.:..::.|   |...:|.||         |.|.||        .|..  .|||.|||. |||
Human     3 RSFLVDSLVLR---EAGEKKAPE---------GSPPPL--------FPYA--VPPPHALHG-LSP 44

  Fly   118 ALLHSYEQRLAWDYQRQLQEHFQAQAQLLRQMTLNPAIIASE------DGSSERSQRSSSSNGST 176
            ...|:                  .:|.||....|  .:.||:      ..:....:.|....||.
Human    45 GACHA------------------RKAGLLCVCPL--CVTASQLHGPPGPPALPLLKASFPPFGSQ 89

  Fly   177 ECCSPTQAEKVEKRSQEDRMEVPKKSPEEQPKGASKSSGDTPLDALFQLSTKNFDEEQDPATLNI 241
            .|.:|                :.::.....|..|...:......||:|.|.    ...||...:.
Human    90 YCHAP----------------LGRQHSAVSPGVAHGPAAAAAAAALYQTSY----PLPDPRQFHC 134

  Fly   242 FATRSN----PKKKRKSRTAFTNQQIFELEKRFLYQKYLSPADRDEIAGGLGLSNAQVITWFQNR 302
            .:..|:    |..|| .|||||:.|:.|||:.|....|||...|.|||..|.||..||..|||||
Human   135 ISVDSSSNQLPSSKR-MRTAFTSTQLLELEREFASNMYLSRLRRIEIATYLNLSEKQVKIWFQNR 198

  Fly   303 RAKLKRD 309
            |.|.|::
Human   199 RVKHKKE 205

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lblNP_001262805.1 COG5576 206..332 CDD:227863 42/108 (39%)
Homeodomain 252..308 CDD:459649 30/55 (55%)
GSX1NP_663632.1 SNAG domain. /evidence=ECO:0000250 1..20 4/19 (21%)
Homeodomain 148..204 CDD:459649 31/56 (55%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 201..264 2/5 (40%)

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