DRSC/TRiP Functional Genomics Resources

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Protein Alignment lbl and ceh-30

DIOPT Version :10

Sequence 1:NP_001262805.1 Gene:lbl / 42541 FlyBaseID:FBgn0008651 Length:410 Species:Drosophila melanogaster
Sequence 2:NP_508524.2 Gene:ceh-30 / 191620 WormBaseID:WBGene00000451 Length:237 Species:Caenorhabditis elegans


Alignment Length:121 Identity:46/121 - (38%)
Similarity:64/121 - (52%) Gaps:19/121 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   207 PKGASKSSGDTPLDALFQLSTKN--FDEEQDPATLNI---FAT---RSNP-----------KKKR 252
            |.....||....:..:.:.|..|  ...:.||:..:|   |:|   .|:|           ||.|
 Worm    32 PCNKISSSSSFRISDILEQSPNNSSHSNDHDPSPQSIKSDFSTSPRASSPGGDRMGSPGSCKKSR 96

  Fly   253 KSRTAFTNQQIFELEKRFLYQKYLSPADRDEIAGGLGLSNAQVITWFQNRRAKLKR 308
            |:||.||::|:.|||..|..|||||..||.::|..:||::.||.||:||||.|.||
 Worm    97 KARTIFTDKQLQELENTFEKQKYLSVQDRMDLAHRMGLTDTQVKTWYQNRRTKWKR 152

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lblNP_001262805.1 COG5576 206..332 CDD:227863 46/121 (38%)
Homeodomain 252..308 CDD:459649 30/55 (55%)
ceh-30NP_508524.2 Homeodomain 96..152 CDD:459649 30/55 (55%)

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