DRSC/TRiP Functional Genomics Resources

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Protein Alignment lbl and ceh-30

DIOPT Version :9

Sequence 1:NP_001262805.1 Gene:lbl / 42541 FlyBaseID:FBgn0008651 Length:410 Species:Drosophila melanogaster
Sequence 2:NP_508524.2 Gene:ceh-30 / 191620 WormBaseID:WBGene00000451 Length:237 Species:Caenorhabditis elegans


Alignment Length:121 Identity:46/121 - (38%)
Similarity:64/121 - (52%) Gaps:19/121 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   207 PKGASKSSGDTPLDALFQLSTKN--FDEEQDPATLNI---FAT---RSNP-----------KKKR 252
            |.....||....:..:.:.|..|  ...:.||:..:|   |:|   .|:|           ||.|
 Worm    32 PCNKISSSSSFRISDILEQSPNNSSHSNDHDPSPQSIKSDFSTSPRASSPGGDRMGSPGSCKKSR 96

  Fly   253 KSRTAFTNQQIFELEKRFLYQKYLSPADRDEIAGGLGLSNAQVITWFQNRRAKLKR 308
            |:||.||::|:.|||..|..|||||..||.::|..:||::.||.||:||||.|.||
 Worm    97 KARTIFTDKQLQELENTFEKQKYLSVQDRMDLAHRMGLTDTQVKTWYQNRRTKWKR 152

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lblNP_001262805.1 COG5576 206..332 CDD:227863 46/121 (38%)
Homeobox 254..307 CDD:278475 28/52 (54%)
ceh-30NP_508524.2 Homeobox 99..151 CDD:278475 28/51 (55%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0488
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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