DRSC/TRiP Functional Genomics Resources

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Protein Alignment lbl and tab-1

DIOPT Version :10

Sequence 1:NP_001262805.1 Gene:lbl / 42541 FlyBaseID:FBgn0008651 Length:410 Species:Drosophila melanogaster
Sequence 2:NP_495392.1 Gene:tab-1 / 185156 WormBaseID:WBGene00006380 Length:197 Species:Caenorhabditis elegans


Alignment Length:211 Identity:61/211 - (28%)
Similarity:97/211 - (45%) Gaps:40/211 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   135 LQEHFQAQAQLLRQMTLNPAIIASEDGSSERSQRSSSSNGSTECCSPTQAEKVEKRSQEDRMEVP 199
            |:.|.....::|:....:|...:|.|..||:|..|..|...|...:||....:     .|::.: 
 Worm    14 LRGHSNEIQRILKLDQTSPTPQSSSDEGSEKSSISVMSVPLTNELTPTITPAL-----SDQLWL- 72

  Fly   200 KKSPEEQPKGASKSSGDTPLDALFQLSTKN-----FDEEQDPATLNIFATRSNPK-----KKRKS 254
                         ::...|::....|:.:|     |....|...|: .||::..:     .:||:
 Worm    73 -------------AAAAFPIEHSLLLAQRNGVFPGFWSTADQIRLS-NATKAYRRLRLECSRRKA 123

  Fly   255 RTAFTNQQIFELEKRFLYQKYLSPADRDEIAGGLGLSNAQVITWFQNRRAKLKRDMEELKKDVQC 319
            ||.|::||:..||:||..|:|||..:|.|:|..|.||..||.|||||||.|.|:   .::||   
 Worm   124 RTVFSDQQLQGLERRFESQRYLSTPERIELANALNLSETQVKTWFQNRRMKHKK---VVRKD--- 182

  Fly   320 EKIPDQSADPNRSHHN 335
                |.|.|.:..:.|
 Worm   183 ----DNSVDDDNGNDN 194

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lblNP_001262805.1 COG5576 206..332 CDD:227863 45/135 (33%)
Homeodomain 252..308 CDD:459649 31/55 (56%)
tab-1NP_495392.1 Homeodomain 121..177 CDD:459649 31/55 (56%)

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