DRSC/TRiP Functional Genomics Resources

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Protein Alignment lbl and ceh-24

DIOPT Version :10

Sequence 1:NP_001262805.1 Gene:lbl / 42541 FlyBaseID:FBgn0008651 Length:410 Species:Drosophila melanogaster
Sequence 2:NP_506419.3 Gene:ceh-24 / 179877 WormBaseID:WBGene00000447 Length:299 Species:Caenorhabditis elegans


Alignment Length:282 Identity:69/282 - (24%)
Similarity:107/282 - (37%) Gaps:67/282 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   157 ASEDGSSERSQ-RSSSSNGSTECCSPTQAEKVEKRSQEDRMEVPKKS--------PEEQPKGASK 212
            :|||..|:||: :|:.|..|...........|..:.|..:|...|..        |...|.|..:
 Worm    28 SSEDDCSKRSKVKSNPSKFSVNSILSPLESLVRVQQQLLKMAASKSGTPGTNAGVPGAFPYGPGR 92

  Fly   213 SSGD---TPLDALFQLSTKNFDEEQDP-----------------ATLNIFATRSNPKKKRKSRTA 257
            ..|:   .|... :..:..|:....||                 :.:|...:.|:..::||.|..
 Worm    93 LPGNYFAGPFPG-YSGAQPNWYNGNDPRFAAAAALLPCSIDPVRSAINHQFSMSSMSQRRKRRVL 156

  Fly   258 FTNQQIFELEKRFLYQKYLSPADRDEIAGGLGLSNAQVITWFQNRRAKLKRDMEELKKDVQCEKI 322
            |:..|::|||:||...|||:..:|:::|..:.|:..||..||||.|.|.||..:| |........
 Worm   157 FSQAQVYELERRFKQAKYLTAPEREQLANSIRLTPTQVKIWFQNHRYKCKRQEKE-KAMSGLGHS 220

  Fly   323 PDQSADPNRSHHNHPHYHQQHQHYAHMQSIGSDRDMDKDRCREKEKDKDKEELRMLKLMTLMRYS 387
            .|.|:.|                        .|.|.|.|:...:..|||.||         ...|
 Worm   221 EDGSSPP------------------------PDNDDDDDKYSIEMDDKDDEE---------EEES 252

  Fly   388 DGKLLYQQPPASYLPIPHRQNA 409
            :..:|   .|:....:|:..||
 Worm   253 EKPVL---KPSGVFGLPYPPNA 271

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lblNP_001262805.1 COG5576 206..332 CDD:227863 40/145 (28%)
Homeodomain 252..308 CDD:459649 24/55 (44%)
ceh-24NP_506419.3 Homeodomain 151..207 CDD:459649 24/55 (44%)

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